Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016- 05-11] 61 sequences; 38,464,024 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq4 251 8e-62 >seq4 Length=3244807 Score = 251 bits (278), Expect = 8e-62 Identities = 483/704 (69%), Gaps = 6/704 (1%) Strand=Plus/Minus Query 53243 GAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAAC 53302 ||||| |||||| | ||| || |||| ||| |||||||| ||||||| || ||||| Sbjct 1908982 GAGACCTACGACATGATGTCGCAGAAGTTCTTCACGCACGCTTCGCCAACACTTTTCAAT 1908923 Query 53303 GCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCG 53362 || ||||| ||||| |||||| ||||||||| | | |||||||| ||| Sbjct 1908922 GCGGGTACACCGTCTCCTCAAATGTCGTCTTGCTTCCTGATCGACATGAAGGAAGACAGC 1908863 Query 53363 ATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGT 53422 ||||| || |||||||| ||| | ||| ||| ||| ||||||||| | || ||| Sbjct 1908862 ATCGAGGGTATCTACGACACGTTGAAGACGTGCGCCATGATCTCCAAGACTGCTGGCGGT 1908803 Query 53423 ATCGGTATCCAC-TGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGG 53481 || ||| | || ||| | | | ||||| | |||| || ||| || || ||||| Sbjct 1908802 ATTGGTCTGAACGTGCACTG-CATTCGTGCCACCGGCTCATACATCGGAGGAACCAACGG 1908744 Query 53482 CGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAA 53541 | || | || || | |||||||| || |||| ||||||||| || ||||||| | Sbjct 1908743 TACCTCCAACGGTCTCATTCCTATGCTTCGTGTCTACAACAACACTGCTAGGTACGTTGA 1908684 Query 53542 CCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGA 53601 ||||||||| ||||| ||| | |||||||||||||| |||||||||||||| || Sbjct 1908683 CCAGGGTGGCAACAAGCGTCCGGGTGCCTTCGCCATCTACCTGGAGCCGTGGCACGCAGA 1908624 Query 53602 CATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTG 53660 | | | || || || |||| ||| || || | || ||| | || ||| |||| Sbjct 1908623 CGTGTTTAGCTTCCTTGACTTGCGAAAGAACCACGGCAAGGAGGAGGTACG-TGCGCGTG 1908565 Query 53661 ACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGG 53720 ||||||| ||||| ||| | |||||||| |||||| | || | || | | | Sbjct 1908564 ACCTGTTCTATGCTCTTTGGGTACCGGACCTGTTCATGAAGCGTGTCCAAGAGAATGGCG 1908505 Query 53721 AGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGT 53780 ||||| ||| | || || | |||| ||| || ||| | ||||||||||||||||| Sbjct 1908504 AGTGGACTCTGTTTTGTCCCAGCGAGGCCCCTGGTCTCGCAGATGTCTACGGTGAGGAGT 1908445 Query 53781 TTAACGAGATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAG-AAGAAGGTCAAGGCG 53839 | | | |||| | ||||| || | ||||||| | | | ||| || || Sbjct 1908444 TCGAGGCTCTGTACGCCAGGTACGAAGCTGAGGGCCG-TGGACGTGAGACCATCCGTGCC 1908386 Query 53840 CGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGC 53899 | || | ||| |||| |||||| || ||| ||||| |||| || |||||| | Sbjct 1908385 CAGAAGCTGTGGTATGCTATCCTCGAGGCTCAGACTGAGACCGGAAACCCCTACATGCTC 1908326 Query 53900 TACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGG 53943 |||||||| | |||| ||||| |||||||||||| |||| Sbjct 1908325 TACAAGGACGCTTGCAACCGCAAGAGTAACCAGAAGAACCTCGG 1908282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215582747800