Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016-
05-11] 61 sequences; 38,464,024 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq4 251 8e-62
>seq4
Length=3244807
Score = 251 bits (278), Expect = 8e-62
Identities = 483/704 (69%), Gaps = 6/704 (1%)
Strand=Plus/Minus
Query 53243 GAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAAC 53302
||||| |||||| | ||| || |||| ||| |||||||| ||||||| || |||||
Sbjct 1908982 GAGACCTACGACATGATGTCGCAGAAGTTCTTCACGCACGCTTCGCCAACACTTTTCAAT 1908923
Query 53303 GCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCG 53362
|| ||||| ||||| |||||| ||||||||| | | |||||||| |||
Sbjct 1908922 GCGGGTACACCGTCTCCTCAAATGTCGTCTTGCTTCCTGATCGACATGAAGGAAGACAGC 1908863
Query 53363 ATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGT 53422
||||| || |||||||| ||| | ||| ||| ||| ||||||||| | || |||
Sbjct 1908862 ATCGAGGGTATCTACGACACGTTGAAGACGTGCGCCATGATCTCCAAGACTGCTGGCGGT 1908803
Query 53423 ATCGGTATCCAC-TGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGG 53481
|| ||| | || ||| | | | ||||| | |||| || ||| || || |||||
Sbjct 1908802 ATTGGTCTGAACGTGCACTG-CATTCGTGCCACCGGCTCATACATCGGAGGAACCAACGG 1908744
Query 53482 CGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAA 53541
| || | || || | |||||||| || |||| ||||||||| || ||||||| |
Sbjct 1908743 TACCTCCAACGGTCTCATTCCTATGCTTCGTGTCTACAACAACACTGCTAGGTACGTTGA 1908684
Query 53542 CCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGA 53601
||||||||| ||||| ||| | |||||||||||||| |||||||||||||| ||
Sbjct 1908683 CCAGGGTGGCAACAAGCGTCCGGGTGCCTTCGCCATCTACCTGGAGCCGTGGCACGCAGA 1908624
Query 53602 CATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTG 53660
| | | || || || |||| ||| || || | || ||| | || ||| ||||
Sbjct 1908623 CGTGTTTAGCTTCCTTGACTTGCGAAAGAACCACGGCAAGGAGGAGGTACG-TGCGCGTG 1908565
Query 53661 ACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGG 53720
||||||| ||||| ||| | |||||||| |||||| | || | || | | |
Sbjct 1908564 ACCTGTTCTATGCTCTTTGGGTACCGGACCTGTTCATGAAGCGTGTCCAAGAGAATGGCG 1908505
Query 53721 AGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGT 53780
||||| ||| | || || | |||| ||| || ||| | |||||||||||||||||
Sbjct 1908504 AGTGGACTCTGTTTTGTCCCAGCGAGGCCCCTGGTCTCGCAGATGTCTACGGTGAGGAGT 1908445
Query 53781 TTAACGAGATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAG-AAGAAGGTCAAGGCG 53839
| | | |||| | ||||| || | ||||||| | | | ||| || ||
Sbjct 1908444 TCGAGGCTCTGTACGCCAGGTACGAAGCTGAGGGCCG-TGGACGTGAGACCATCCGTGCC 1908386
Query 53840 CGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGC 53899
| || | ||| |||| |||||| || ||| ||||| |||| || |||||| |
Sbjct 1908385 CAGAAGCTGTGGTATGCTATCCTCGAGGCTCAGACTGAGACCGGAAACCCCTACATGCTC 1908326
Query 53900 TACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGG 53943
|||||||| | |||| ||||| |||||||||||| ||||
Sbjct 1908325 TACAAGGACGCTTGCAACCGCAAGAGTAACCAGAAGAACCTCGG 1908282
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547215582747800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |