Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016-
05-11] 61 sequences; 38,464,024 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq4 242 4e-59
seq1 152 6e-32
seq7 107 2e-18
seq11 100 3e-16
>seq4
Length=3244807
Score = 242 bits (268), Expect = 4e-59
Identities = 906/1405 (64%), Gaps = 44/1405 (3%)
Strand=Plus/Plus
Query 80373 GCGACGCAGA-TACAGGTTTGTAGTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCT 80431
|||||| ||| || | ||| | |||||| ||||| || |||||||| ||||||||||
Sbjct 1907657 GCGACG-AGAGTAGATGTTGGAAGTGTAGGGCTCGAAGCACTCGTTGTACCCGAGGATCT 1907715
Query 80432 GAGCCGTGCTCGCCGTCGGCATCGGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCT 80491
| | || || |||||||| || | || | || || || || | |||||||
Sbjct 1907716 GCGAAGTAGAGGCTGTCGGCATGGGTGCCACGAGCAAAGAGTTGCGGACACCGTGCTGGG 1907775
Query 80492 TGATATCCTCGCGCAAATCTGACCAAAAATCAACCCCAA--CGCTG----TGACC--CCA 80543
|| | ||| |||| | ||| || || ||| || || |||| |||
Sbjct 1907776 CAATCTTCTCCTTCAAAGACGCCCAG---TC--CCACAAGTCGGTGGGGGTGACGTTCCA 1907830
Query 80544 CATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCC 80603
|||||||| || | ||||||| || | |||||||| | | ||||||||||| ||
Sbjct 1907831 CATGTCGTATTGGAGAATGCCCTGAGAAACAGGAGACCCTTCATATGTCTCGTACGGTCC 1907890
Query 80604 CTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAAGAC 80663
| ||||||||| || || ||| | | || ||||| || ||| ||||||||
Sbjct 1907891 GAGCTCCTTGGCCAGGTCGCAGGACGAAGTCAAAGCTGCGTGGTAGATGGTCTCAAAGAT 1907950
Query 80664 GCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGAACAC 80723
|||| | |||| || ||||| | || | | || |||
Sbjct 1907951 CTGGATGTTGAGTTTCTTAGCCTCGGGAGATTCGAAAGGCATACGAAGAGACAGGAAGGT 1908010
Query 80724 GTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCTCG-G 80782
||||| || || || || |||| ||| || ||||| | ||| | || || |
Sbjct 1908011 ATCAGCAAGACCTTGTACACCGAGACCGACGGGCCGGTGCCTGAAGTT-GCTCTTACGAG 1908069
Query 80783 CCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCC 80842
||||||| | ||||| ||| ||||||| ||||| |||||| || |||| |
Sbjct 1908070 CCTCCGGGACGGGGTAGTGGTTGACCTCGATGATCTTGTTCAAGTTGCGAGTGACAATCT 1908129
Query 80843 GTGTAACATCATGAAGTTTCTGAAAGTCGAATTGG------TTCCCCTTCACAAATGCCG 80896
| || || || ||||| ||||| ||||| || | ||| | | ||||| |
Sbjct 1908130 GAGTGACTTCGTGAAGCTTCTGGAAGTCAAACACGCCATTCTTCTCGTCGACAAACCTAG 1908189
Query 80897 GAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGA 80956
| ||| || || || |||||||| ||||| ||||| |||| | || |||||| ||
Sbjct 1908190 GGAGGGCGAGAGAGGCAAGATTGCATACGGCGACCTCGTCAGGGGCGGTGTACTCGATGA 1908249
Query 80957 TTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGT 81016
| || ||||| | || || || || || ||||| |||||||| |||| ||
Sbjct 1908250 TCTCAGTGCAGAGGTTGGAGCTGCGGATAGTTCCGAGGTTCTTCTGGTTACTCTTGCGGT 1908309
Query 81017 TGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGG 81076
||||||||||||||||| |||||| ||| | |||||||| ||| | || |||||| |
Sbjct 1908310 TGCAAGCGTCCTTGTAGAGCATGTAGGGGTTTCCGGTCTCAGTCTGAGCCTCGAGGATAG 1908369
Query 81077 CGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGG 81136
| | ||| | || | || || || || ||| || || | ||| |||
Sbjct 1908370 CATACCACAGCTTCTGGGCACGGATGGTCTCACGTCCACGGCCCTCAGCTTCGTACCTGG 1908429
Query 81137 CGTAAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGC 81196
|||| | ||||||| |||||| | || | ||| | ||| |||| | || |
Sbjct 1908430 CGTACAGAGCCTCGAACTCCTCACCGTAGACATCTGCGAGACCAGGGGCCTCGCTGGGAC 1908489
Query 81197 ACATCAGGTGCCAGTCGGTGTCGTTCTCT---ACAGCCTTCATGAAAGCGTCAGGGATCC 81253
| | ||| ||| ||| | |||||| ||| ||||||||| ||| || | ||
Sbjct 1908490 AAAACAGAGTCCACTCGC---CATTCTCTTGGACACGCTTCATGAACAGGTCCGGTACCC 1908546
Query 81254 AGAGGGCGGTGAACAGGTCGCG-GCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAAC 81312
| || || ||||||||| || ||| || ||||||| | || ||||| |||||
Sbjct 1908547 AAAGAGCATAGAACAGGTCACGCGCA-CGTACCTCCTCCTTGCCGTGGTTCTTTCGCAAG 1908605
Query 81313 TCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTG 81372
|| || ||| | | ||| || ||||| |||||||| || | ||||| | |||
Sbjct 1908606 TCAAGGAAGCTAAACACGTCTGCGTGCCACGGCTCCAGGTAGATGGCGAAGGCACCCG-- 1908663
Query 81373 CGACG------GCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATA 81426
|||| ||||||||||| ||||| | ||||| ||| | ||||| | ||||
Sbjct 1908664 -GACGCTTGTTGCCACCCTGGTCAACGTACCTAGCAGTGTTGTTGTAGACACGAAGCATA 1908722
Query 81427 GGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCA-- 81484
|| |||| ||| | || |||||| || || |||| || || |||| || |
Sbjct 1908723 GGAATGAGACCGTTGGAGGTACCGTTGGTTCCTCCGATGTATGAGCCGGTGGCACGAATG 1908782
Query 81485 CCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCA 81544
| ||| || | |||| || || || | ||| || ||| || ||| ||||
Sbjct 1908783 CAGTGCACGTTCA--GACCAATACCGCCAGCAGTCTTGGAGATCATGGCGCACGTCTTCA 1908840
Query 81545 TGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACA 81604
|| || || || ||||||||||| |||| |||||||| | || ||| || ||||
Sbjct 1908841 ACGTGTCGTAGATACCCTCGATGCTGTCTTCCTTCATGTCGATCAGGAAGCAAGACGACA 1908900
Query 81605 TCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGT 81664
| ||||| || || |||||||| |||||||| | ||||| |||| | |
Sbjct 1908901 TTTGAGGAGACGGTGTACCCGCATTGAAAAGTGTTGGCGAAGCGTGCGTGAAGAACTTCT 1908960
Query 81665 TTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAG 81724
||||||| ||| ||||| || | | |||||| || ||||| || || | ||
Sbjct 1908961 GCGACATCATGTCGTAGGTCTCGATAGCCTTCTCAATATCCTCGCCGTGGATGCCCACAG 1909020
Query 81725 CTACACGCATAAACATGTACTGGGG 81749
|||||||||| | ||||| ||| ||
Sbjct 1909021 CTACACGCATCAGCATGTGCTGTGG 1909045
>seq1
Length=5402283
Score = 152 bits (168), Expect = 6e-32
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||||||||||||| | ||||||||||| || || || || || ||||||
Sbjct 3266800 ATGCAGATCTTTGTCAAGACGTTGACCGGCAAGACCATCACCCTCGAAGTCGAGTCATCC 3266859
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||| | || ||||| | || ||||| ||||||||||| |||||||| || |||
Sbjct 3266860 GATACCATCGACAACGTGAAGTCCAAGATTCAAGACAAGGAGGGTATTCCTCCGGATCAG 3266919
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || || || || ||||| | || || | ||||| || | ||||| ||
Sbjct 3266920 CAGCGTCTCATCTTCGCAGGCAAGCAGTTGGAAGACGGCCGTACGCTTTCCGACTACAAC 3266979
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| || ||||||||||| || || | || | ||||| || || ||
Sbjct 3266980 ATTCAGAAGGAATCCACCCTGCACTTGGTGCTTCGTCTCCGTGGCGG 3267026
Score = 140 bits (154), Expect = 4e-28
Identities = 169/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || |||||||| || ||||| ||||| || || || ||||| ||||||
Sbjct 3267028 ATGCAGATTTTCGTCAAGACTCTCACCGGTAAGACGATCACACTGGAGGTGGAGTCATCC 3267087
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | ||| ||||| | || || ||||||||||| || ||||| || ||||||
Sbjct 3267088 GACACCATCGATAATGTGAAGTCGAAGATCCAGGACAAGGAAGGCATTCCCCCGGACCAG 3267147
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || || || || ||||| | || || | ||||| || | ||||| |||
Sbjct 3267148 CAGCGTCTCATCTTCGCAGGCAAGCAGTTGGAAGACGGCCGTACGCTTTCCGACTACAAT 3267207
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635
|||| ||||| || || || || | || | ||||| || || || ||
Sbjct 3267208 ATCCAGAAGGAGTCTACCCTGCACTTGGTGCTCCGTCTGCGTGGCGGCCA 3267257
Score = 132 bits (146), Expect = 5e-26
Identities = 151/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489
|| |||||||| ||||| || || ||||| || ||| | |||| || | ||| |
Sbjct 3266596 ACGGGCAAGACCATTACGCTCGAAGTTGAATCGTCTGACACGATTGACAACGTCAAGTCG 3266655
Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549
|| || ||||| |||||||| |||||||| ||||||||||| | || || || || |||
Sbjct 3266656 AAGATCCAGGATAAGGAGGGTATTCCTCCGGACCAGCAGCGCTTGATCTTCGCCGGCAAG 3266715
Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609
|| || ||||||| ||| ||||| | ||||| || | || ||||| || || || |||
Sbjct 3266716 CAGCTTGAGGATGGTCGCACCCTGTCCGACTACAACATTCAGAAGGAGTCTACACTCCAT 3266775
Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632
|| ||| |||| || || |||||
Sbjct 3266776 CTCGTCCTGCGCCTCCGTGGTGG 3266798
Score = 131 bits (144), Expect = 2e-25
Identities = 152/205 (74%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 27428 TTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGG 27487
||||||||||||| || || | ||||| ||||| || | ||| | ||| | |||
Sbjct 3266311 TTACCGGCAAGACCATCACCTTGGAGGTGGAGTCTTCCGACACCATCGACAATGTCAAGT 3266370
Query 27488 CTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTA 27547
| || || |||||||||||||| || || || |||||||| || | || || || || |
Sbjct 3266371 CCAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCAGCAACGCTTGATCTTCGCCGGCA 3266430
Query 27548 AGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTC 27607
|||| |||||||||| ||| ||||| | || || || |||| |||||||| || || |
Sbjct 3266431 AGCAGCTCGAGGATGGTCGCACCCTGTCTGATTACAACATCCAGAAGGAATCGACGCTCC 3266490
Query 27608 ATCTAGTCTTGCGTCTTCGCGGTGG 27632
| || ||| | || || ||||||||
Sbjct 3266491 ACCTCGTCCTCCGCCTGCGCGGTGG 3266515
>seq7
Length=2328918
Score = 107 bits (118), Expect = 2e-18
Identities = 104/134 (78%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558
||||||||||||||||| || |||||||||||||| || || || || ||||| ||||||
Sbjct 679448 GACAAGGAGGGAATTCCCCCGGACCAGCAGCGTCTCATCTTCGCCGGAAAGCAGCTCGAG 679389
Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
|||| || ||||| | ||||| || |||| ||||| || || || || | ||| |
Sbjct 679388 GATGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACACTCCACTTGGTCCTC 679329
Query 27619 CGTCTTCGCGGTGG 27632
|| || || |||||
Sbjct 679328 CGCCTGCGTGGTGG 679315
>seq11
Length=1384065
Score = 100 bits (110), Expect = 3e-16
Identities = 115/155 (74%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537
||| | ||| | || || ||||||||||| || || || || ||||||||||| || ||
Sbjct 1031366 AATGTCAAGTCCAAGATCCAGGACAAGGAAGGCATCCCGCCGGACCAGCAGCGCCTGATC 1031307
Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597
|| || || ||||| |||||||| | || ||||| | ||||| || |||| |||||
Sbjct 1031306 TTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAG 1031247
Query 27598 TCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|| || || || | ||| | ||||| ||||| ||
Sbjct 1031246 TCGACCCTGCACTTGGTCCTTCGTCTGCGCGGCGG 1031212
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570309965138320
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