Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016- 05-11] 61 sequences; 38,464,024 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq7 102 7e-17 >seq7 Length=2328918 Score = 102 bits (112), Expect = 7e-17 Identities = 203/293 (69%), Gaps = 6/293 (2%) Strand=Plus/Plus Query 6728 ACGTAGAATTG-GCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGG 6786 ||||||||||| ||| | ||||||| || |||||||||||| || ||| || Sbjct 1960230 ACGTAGAATTGCGCA-AACATGTGGCAAGGCGGGAGCGCCATCTTCTTCAGGTCCGCGGG 1960288 Query 6787 GTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCAC 6846 ||||||||||| | | ||| | | ||||| || || ||||| | || || || Sbjct 1960289 GTTCCACGCGCTGAGTATGATGCGGCGGTCATATGGCTTGTTCTTCAGCTTATCAATGAC 1960348 Query 6847 GTACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGC 6906 | | ||||||||| | ||||| || | |||||| | ||| ||| ||||| || Sbjct 1960349 CTCCGCCAGCTGGTCGACGCCCTGGCCGGTATAGTCTACATCGTGTCCCTTGTACTCGGC 1960408 Query 6907 CCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAG-TCGCCCTCCTCCCGAGATG 6965 |||||||| | ||| ||||| || || | ||||||| || ||||| ||||| | | Sbjct 1960409 GCCAAAGTGCCGCCATTGGAAGCCATACA-CGGGCCCGAGATCGCCTTCCTCGTGGTGCG 1960467 Query 6966 GGAACCCC-CGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTT 7017 || |||| ||| |||| || | || || |||| | ||||||||||||| Sbjct 1960468 AGAGCCCCACGC-TGTCGAGGTACTCGCGGCTGCCGTTACCGTCCCAGATCTT 1960519 Score = 102 bits (112), Expect = 7e-17 Identities = 203/293 (69%), Gaps = 6/293 (2%) Strand=Plus/Minus Query 34328 AAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCG-GGGGTTCCCATCTCG 34386 ||||||||||||| | |||| || || | || |||| ||| |||| || | | Sbjct 1960519 AAGATCTGGGACGGTAACGGCAGCCGCGAGTACCTCGACA-GCGTGGGGCTCTCGCACCA 1960461 Query 34387 GGAGGAGGGCGA-CTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGT 34445 ||||| ||||| || ||||||| | || || ||||| ||| | |||||||| || |||| Sbjct 1960460 CGAGGAAGGCGATCTCGGGCCCG-TGTATGGCTTCCAATGGCGGCACTTTGGCGCCGAGT 1960402 Query 34446 ATCGGGGGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCG 34505 | ||| ||| | |||||| | || ||||| | ||||||||| | | || || | Sbjct 1960401 ACAAGGGACACGATGTAGACTATACCGGCCAGGGCGTCGACCAGCTGGCGGAGGTCATTG 1960342 Query 34506 ACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGG 34565 | | ||||| || || ||||| | | ||| | | ||||||||||||| || Sbjct 1960341 ATAAGCTGAAGAACAAGCCATATGACCGCCGCATCATACTCAGCGCGTGGAACCCCGCGG 1960282 Query 34566 ATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGC-CAATTCTACGT 34617 | || |||||||||||| || ||||||| | ||| ||||||||||| Sbjct 1960281 ACCTGAAGAAGATGGCGCTCCCGCCTTGCCACATGTT-TGCGCAATTCTACGT 1960230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448262058199920