Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016-
05-11] 61 sequences; 38,464,024 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq7 102 7e-17
>seq7
Length=2328918
Score = 102 bits (112), Expect = 7e-17
Identities = 203/293 (69%), Gaps = 6/293 (2%)
Strand=Plus/Plus
Query 6728 ACGTAGAATTG-GCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGG 6786
||||||||||| ||| | ||||||| || |||||||||||| || ||| ||
Sbjct 1960230 ACGTAGAATTGCGCA-AACATGTGGCAAGGCGGGAGCGCCATCTTCTTCAGGTCCGCGGG 1960288
Query 6787 GTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCAC 6846
||||||||||| | | ||| | | ||||| || || ||||| | || || ||
Sbjct 1960289 GTTCCACGCGCTGAGTATGATGCGGCGGTCATATGGCTTGTTCTTCAGCTTATCAATGAC 1960348
Query 6847 GTACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGC 6906
| | ||||||||| | ||||| || | |||||| | ||| ||| ||||| ||
Sbjct 1960349 CTCCGCCAGCTGGTCGACGCCCTGGCCGGTATAGTCTACATCGTGTCCCTTGTACTCGGC 1960408
Query 6907 CCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAG-TCGCCCTCCTCCCGAGATG 6965
|||||||| | ||| ||||| || || | ||||||| || ||||| ||||| | |
Sbjct 1960409 GCCAAAGTGCCGCCATTGGAAGCCATACA-CGGGCCCGAGATCGCCTTCCTCGTGGTGCG 1960467
Query 6966 GGAACCCC-CGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTT 7017
|| |||| ||| |||| || | || || |||| | |||||||||||||
Sbjct 1960468 AGAGCCCCACGC-TGTCGAGGTACTCGCGGCTGCCGTTACCGTCCCAGATCTT 1960519
Score = 102 bits (112), Expect = 7e-17
Identities = 203/293 (69%), Gaps = 6/293 (2%)
Strand=Plus/Minus
Query 34328 AAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCG-GGGGTTCCCATCTCG 34386
||||||||||||| | |||| || || | || |||| ||| |||| || | |
Sbjct 1960519 AAGATCTGGGACGGTAACGGCAGCCGCGAGTACCTCGACA-GCGTGGGGCTCTCGCACCA 1960461
Query 34387 GGAGGAGGGCGA-CTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGT 34445
||||| ||||| || ||||||| | || || ||||| ||| | |||||||| || ||||
Sbjct 1960460 CGAGGAAGGCGATCTCGGGCCCG-TGTATGGCTTCCAATGGCGGCACTTTGGCGCCGAGT 1960402
Query 34446 ATCGGGGGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCG 34505
| ||| ||| | |||||| | || ||||| | ||||||||| | | || || |
Sbjct 1960401 ACAAGGGACACGATGTAGACTATACCGGCCAGGGCGTCGACCAGCTGGCGGAGGTCATTG 1960342
Query 34506 ACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGG 34565
| | ||||| || || ||||| | | ||| | | ||||||||||||| ||
Sbjct 1960341 ATAAGCTGAAGAACAAGCCATATGACCGCCGCATCATACTCAGCGCGTGGAACCCCGCGG 1960282
Query 34566 ATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGC-CAATTCTACGT 34617
| || |||||||||||| || ||||||| | ||| |||||||||||
Sbjct 1960281 ACCTGAAGAAGATGGCGCTCCCGCCTTGCCACATGTT-TGCGCAATTCTACGT 1960230
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448262058199920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |