Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016-
05-11] 61 sequences; 38,464,024 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq1 145 2e-29
seq11 91.5 4e-13
>seq1
Length=5402283
Score = 145 bits (160), Expect = 2e-29
Identities = 145/188 (77%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| |||||||| || ||||| || |||| |||||||| | || || | |||||
Sbjct 3266500 AGGACGAGGTGGAGCGTCGATTCCTTCTGGATGTTGTAATCAGACAGGGTGCGACCATCC 3266441
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || |||||||| | ||||| ||||| ||||| || || ||||||||
Sbjct 3266440 TCGAGCTGCTTGCCGGCGAAGATCAAGCGTTGCTGGTCCGGCGGGATGCCCTCCTTGTCC 3266381
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| ||| ||||||||||| || | ||||| || || ||||| |||
Sbjct 3266380 TGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCCAAGGTGATGGTC 3266321
Query 225682 TTGCCCGT 225689
||||| ||
Sbjct 3266320 TTGCCGGT 3266313
Score = 134 bits (148), Expect = 3e-26
Identities = 157/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || | ||| || || || || || |||| |||||| |||| | || | || |||
Sbjct 3267239 AGCACCAAGTGCAGGGTAGACTCCTTCTGGATATTGTAGTCGGAAAGCGTACGGCCGTCT 3267180
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| | |||||| || |||||||| || || || ||||| || ||||| |||||||||||
Sbjct 3267179 TCCAACTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCTTCCTTGTCC 3267120
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||||||| ||||||||||| || | ||||| || | |||||||||
Sbjct 3267119 TGGATCTTCGACTTCACATTATCGATGGTGTCGGATGACTCCACCTCCAGTGTGATCGTC 3267060
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || || | ||| || | ||| | |||||
Sbjct 3267059 TTACCGGTGAGAGTCTTGACGAAAATCTGCAT 3267028
Score = 118 bits (130), Expect = 3e-21
Identities = 145/198 (73%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| || | |||||| || ||||| || || || || || | ||||| |||| || ||
Sbjct 3266793 ACGGAGGCGCAGGACGAGATGGAGTGTAGACTCCTTCTGAATGTTGTAGTCGGACAGGGT 3266734
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| ||||| || |||||||| || |||||||| | || || ||||| || ||||||||
Sbjct 3266733 GCGACCATCCTCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGAGGAATACC 3266674
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||||| || |||||||| ||| || || || ||||| || | ||| || || |
Sbjct 3266673 CTCCTTATCCTGGATCTTCGACTTGACGTTGTCAATCGTGTCAGACGATTCAACTTCGAG 3266614
Query 225672 CGTGATCGTCTTGCCCGT 225689
||| || |||||||||||
Sbjct 3266613 CGTAATGGTCTTGCCCGT 3266596
Score = 116 bits (128), Expect = 9e-21
Identities = 144/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || | ||| || |||||||| || || | ||||| |||| | || | || |||
Sbjct 3267011 AGCACCAAGTGCAGGGTGGATTCCTTCTGAATGTTGTAGTCGGAAAGCGTACGGCCGTCT 3266952
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| | |||||| || |||||||| || || || || || || |||||||| |||||||||
Sbjct 3266951 TCCAACTGCTTGCCTGCGAAGATGAGACGCTGCTGATCCGGAGGAATACCCTCCTTGTCT 3266892
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|| ||||| |||||| |||||||| || || | || || || | ||||| |||
Sbjct 3266891 TGAATCTTGGACTTCACGTTGTCGATGGTATCGGATGACTCGACTTCGAGGGTGATGGTC 3266832
Query 225682 TTGCCCGTCAAAGTTTT 225698
||||| ||||| || ||
Sbjct 3266831 TTGCCGGTCAACGTCTT 3266815
>seq11
Length=1384065
Score = 91.5 bits (100), Expect = 4e-13
Identities = 97/128 (76%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| | ||| || || || || || |||| ||||| |||| | || | || ||
Sbjct 1031227 AGGACCAAGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 1031286
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || |||||||| || || || ||||| ||||| || |||||||||||
Sbjct 1031287 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCTTCCTTGTCC 1031346
Query 225622 TGGATCTT 225629
||||||||
Sbjct 1031347 TGGATCTT 1031354
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192530267962334
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |