Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016- 05-11] 61 sequences; 38,464,024 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq7 107 2e-18 >seq7 Length=2328918 Score = 107 bits (118), Expect = 2e-18 Identities = 161/225 (72%), Gaps = 3/225 (1%) Strand=Plus/Plus Query 29586 CCACCCTCCTGTT-TATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAATC 29644 ||| |||||| | |||| | || || |||||| || ||||||||||| ||||| | | Sbjct 1959948 CCAACCTCCTTATGTATCTTTAGCGTCGGAAAGTCCCTCGGCTCCCTCTCCAGCTGGACC 1960007 Query 29645 CTCAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTG-GACAAACTC 29703 ||| || || |||||||| | ||| ||||| ||||| |||| || || | ||| || Sbjct 1960008 TTCAACGCGTCGACGTGGTCGACGTACACGTGCGCATCGCCCATCGTATGCGTAAAAGTC 1960067 Query 29704 TCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGAT 29763 || || || || ||||||||| ||||| || || || | ||||| ||||| Sbjct 1960068 -CCGGGCGTGAGATCGCACGCGTGAGCCAGCATGTGGGTTAGCAGCGCATAGCTCGCGAT 1960126 Query 29764 GTTAAAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAG 29808 ||| ||||| || || ||||||||||| | || |||||| || Sbjct 1960127 GTTGAAGGGGACGCCAAGCCCCATGTCGCAGCTCCGCTGGTAAAG 1960171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406162898043046