Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016- 05-11] 61 sequences; 38,464,024 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq7 131 1e-25 >seq7 Length=2328918 Score = 131 bits (144), Expect = 1e-25 Identities = 443/680 (65%), Gaps = 40/680 (6%) Strand=Plus/Plus Query 27080 CCACCCTCCTGTT-TATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTC 27138 ||| |||||| | |||| | || || |||||| || ||||||||||| ||||| | Sbjct 1959948 CCAACCTCCTTATGTATCTTTAGCGTCGGAAAGTCCCTCGGCTCCCTCTCCAGCTGGACC 1960007 Query 27139 TTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCT 27198 |||| || || ||||| || | ||| ||||| || || |||| || || ||| | Sbjct 1960008 TTCAACGCGTCGACGTGGTCGACGTACACGTGCGCATCGCCCATCGTATGCGTAAAAG-T 1960066 Query 27199 CCCGGTTCT-AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGAT 27257 ||||| | || || ||||||||| ||||| || || || | ||||| ||||| Sbjct 1960067 CCCGGGCGTGAGATCGCACGCGTGAGCCAGCATGTGGGTTAGCAGCGCATAGCTCGCGAT 1960126 Query 27258 GTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAG----CTGA----CAC 27309 ||| ||||| || || ||||||||||| | || |||||| || ||| ||| Sbjct 1960127 GTTGAAGGGGACGCCAAGCCCCATGTCGCAGCTCCGCTGGTAAAGGATACTGTGCAGCAC 1960186 Query 27310 GAGAG-----CTCTCCA---------TCGCTTACGTAAAACTGACATA----TG-GC--- 27347 | |||||| |||| | || ||| || || || || Sbjct 1960187 GCCCCTCTTCCTCTCCTCACCCTCTTTCGCCTGCGGAAACGACACGTAGAATTGCGCAAA 1960246 Query 27348 ---GTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGAT 27404 |||||| || || || ||||| || ||| ||||||||| |||| | || Sbjct 1960247 CATGTGGCAAGGCGGGAGCGCCATCTTCTTCAGGTCCGCGGGGTTCCACGCGCTGAGTAT 1960306 Query 27405 GATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCAC 27464 |||||| | ||| | ||| |||||| | | || | | | | |||||| || || Sbjct 1960307 GATGCGGCGGTCATATGGCTTGTTCTTCAGCTTATCAATGACCTCCGCCAGCTGGTCGAC 1960366 Query 27465 CCCCATCCCCGAGTAGTCTACCCTCATGTCCGT-GTACTCTGCTCCGAAATGCCTCCATT 27523 ||| || | |||||||| || ||||| | |||||| || || || |||| ||||| Sbjct 1960367 GCCCTGGCCGGTATAGTCTACA-TCGTGTCCCTTGTACTCGGCGCCAAAGTGCCGCCATT 1960425 Query 27524 GGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCT-TGTCC 27582 |||| || ||||| || || || || || || || |||| || ||||| | |||| Sbjct 1960426 GGAAGCCATACACGGGCCCGAGATCGCCTTCCTCGTGGTGCGAGA-GCCCCACGCTGTCG 1960484 Query 27583 AAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTG 27642 | | || | | ||||| ||||||||||||| | || || ||||| || Sbjct 1960485 AGGTACTCGCGGCTGCCGTTACCGTCCCAGATCTTGATGCCGGCGTCTGAGAGGGGCTTC 1960544 Query 27643 GAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACC 27702 |||| |||| ||| ||| ||||| || || || | |||||||| | ||||| Sbjct 1960545 GAGTATGTGCTGCCTGCGACAAACCAGAGGAGTTCGGCTACGACGGCGCGCAGGAAGACG 1960604 Query 27703 CTCTTGGTCGTGAGGAGGGG 27722 | ||| || ||||||||||| Sbjct 1960605 CGCTTTGTGGTGAGGAGGGG 1960624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369506925294491