Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016-
05-11] 61 sequences; 38,464,024 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq7 131 1e-25
>seq7
Length=2328918
Score = 131 bits (144), Expect = 1e-25
Identities = 443/680 (65%), Gaps = 40/680 (6%)
Strand=Plus/Plus
Query 27080 CCACCCTCCTGTT-TATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTC 27138
||| |||||| | |||| | || || |||||| || ||||||||||| ||||| |
Sbjct 1959948 CCAACCTCCTTATGTATCTTTAGCGTCGGAAAGTCCCTCGGCTCCCTCTCCAGCTGGACC 1960007
Query 27139 TTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCT 27198
|||| || || ||||| || | ||| ||||| || || |||| || || ||| |
Sbjct 1960008 TTCAACGCGTCGACGTGGTCGACGTACACGTGCGCATCGCCCATCGTATGCGTAAAAG-T 1960066
Query 27199 CCCGGTTCT-AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGAT 27257
||||| | || || ||||||||| ||||| || || || | ||||| |||||
Sbjct 1960067 CCCGGGCGTGAGATCGCACGCGTGAGCCAGCATGTGGGTTAGCAGCGCATAGCTCGCGAT 1960126
Query 27258 GTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAG----CTGA----CAC 27309
||| ||||| || || ||||||||||| | || |||||| || ||| |||
Sbjct 1960127 GTTGAAGGGGACGCCAAGCCCCATGTCGCAGCTCCGCTGGTAAAGGATACTGTGCAGCAC 1960186
Query 27310 GAGAG-----CTCTCCA---------TCGCTTACGTAAAACTGACATA----TG-GC--- 27347
| |||||| |||| | || ||| || || || ||
Sbjct 1960187 GCCCCTCTTCCTCTCCTCACCCTCTTTCGCCTGCGGAAACGACACGTAGAATTGCGCAAA 1960246
Query 27348 ---GTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGAT 27404
|||||| || || || ||||| || ||| ||||||||| |||| | ||
Sbjct 1960247 CATGTGGCAAGGCGGGAGCGCCATCTTCTTCAGGTCCGCGGGGTTCCACGCGCTGAGTAT 1960306
Query 27405 GATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCAC 27464
|||||| | ||| | ||| |||||| | | || | | | | |||||| || ||
Sbjct 1960307 GATGCGGCGGTCATATGGCTTGTTCTTCAGCTTATCAATGACCTCCGCCAGCTGGTCGAC 1960366
Query 27465 CCCCATCCCCGAGTAGTCTACCCTCATGTCCGT-GTACTCTGCTCCGAAATGCCTCCATT 27523
||| || | |||||||| || ||||| | |||||| || || || |||| |||||
Sbjct 1960367 GCCCTGGCCGGTATAGTCTACA-TCGTGTCCCTTGTACTCGGCGCCAAAGTGCCGCCATT 1960425
Query 27524 GGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCT-TGTCC 27582
|||| || ||||| || || || || || || || |||| || ||||| | ||||
Sbjct 1960426 GGAAGCCATACACGGGCCCGAGATCGCCTTCCTCGTGGTGCGAGA-GCCCCACGCTGTCG 1960484
Query 27583 AAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTG 27642
| | || | | ||||| ||||||||||||| | || || ||||| ||
Sbjct 1960485 AGGTACTCGCGGCTGCCGTTACCGTCCCAGATCTTGATGCCGGCGTCTGAGAGGGGCTTC 1960544
Query 27643 GAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACC 27702
|||| |||| ||| ||| ||||| || || || | |||||||| | |||||
Sbjct 1960545 GAGTATGTGCTGCCTGCGACAAACCAGAGGAGTTCGGCTACGACGGCGCGCAGGAAGACG 1960604
Query 27703 CTCTTGGTCGTGAGGAGGGG 27722
| ||| || |||||||||||
Sbjct 1960605 CGCTTTGTGGTGAGGAGGGG 1960624
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369506925294491
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |