Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016- 05-11] 61 sequences; 38,464,024 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq4 87.8 2e-12 >seq4 Length=3244807 Score = 87.8 bits (96), Expect = 2e-12 Identities = 383/603 (64%), Gaps = 5/603 (1%) Strand=Plus/Plus Query 76782 GTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 76841 || ||||| || |||| ||| || | | || ||||| ||||||| ||||| || || Sbjct 1907289 GTGAACTGGATAGGAGCAGAGGCAGCCATGGTTCGTAGGTAGTACAATCCAGTCTTCAGC 1907348 Query 76842 CCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATA 76901 || || |||| ||| || |||||| || | ||| |||| || ||| Sbjct 1907349 CCAAGCTTCCAACCGGCAAAGTGCATGGACGTGATCTTGCCCATGGTAGGCTCCTTCATA 1907408 Query 76902 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 76961 ||||| |||| ||||||| ||||||||||| || || | ||||| | ||| | || Sbjct 1907409 TGAATGTTCAGCGACTGAGACTGATCGATGAAGGCACCACGGTCAGCGGACATCTGAATG 1907468 Query 76962 ATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGG 77021 ||| | || | |||||||||| || ||| | | ||||| ||||| |||| | Sbjct 1907469 ATGTTACGCTGCGAGATTTCCCAAACGGTCTTGTACAGGGCCTTGATCTCATCGGGAATG 1907528 Query 77022 TTTG---TATTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCATCATTC 77078 || | | || |||||||||||||| | || ||| ||||| || | || | Sbjct 1907529 TTGGGGATGCGCTGGATGGAACCACCATCGGCGATGATTCGGTTCTTCATGTTGTCTGAC 1907588 Query 77079 CACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTCCA 77138 || | | | || | | | | || | ||| || || | || || || ||| Sbjct 1907589 CAGAGGCCCATGTCGACAAGATCCTTGAGCAACCAAGGGTTGACGACCTGGAACTCACCA 1907648 Query 77139 GACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCC 77198 | ||| || | ||||| ||| || || || || || || | | || |||| || Sbjct 1907649 GCCAACACGCGACGAGAGTAGATGTTGGAAGTGTAGGGCTCGAAGCACTCGTTGTACCCG 1907708 Query 77199 AAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACCA 77258 | || || | |||||| || || ||||| |||||||| | ||| || | || ||| Sbjct 1907709 AGGATCTGCGAAGTAGAGGCTGTCGGCATGGGTGCCACGAGCAAAGAGTTGCGGACACCG 1907768 Query 77259 TG-TGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAACATC 77317 || || | || || || || | | | ||| ||||| | || | || || | Sbjct 1907769 TGCTGGGC-AATCTTCTCCTTCAAAGACGCCCAGTCCCACAAGTCGGTGGGGGTGACGTT 1907827 Query 77318 CCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTATATGTTTCATAAGG 77377 ||| | |||||||| ||||| || | | | || || || | |||||| || || || Sbjct 1907828 CCACATGTCGTATTGGAGAATGCCCTGAGAAACAGGAGACCCTTCATATGTCTCGTACGG 1907887 Query 77378 TCC 77380 ||| Sbjct 1907888 TCC 1907890 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668270315040