Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016-
05-11] 61 sequences; 38,464,024 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq1 96.9 8e-15
>seq1
Length=5402283
Score = 96.9 bits (106), Expect = 8e-15
Identities = 147/208 (71%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || || |||||||| || ||||| ||||| |||| | || | || ||||| |
Sbjct 3267234 CAAG-TGCAGGGTAGACTCCTTCTGGATATTGTAGTCGGAAAGCGTACGGCCGTCTTCCA 3267176
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
|| || |||||||| || | ||||||||||| | || |||||||| || || |
Sbjct 3267175 ACTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCTTCCTTGTCCTGGA 3267116
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || || ||| | || | | |||| || ||| || || || || || || || |
Sbjct 3267115 TCTTCGACTTCACATTATCGATGGTGTCGGATGACTCCACCTCCAGTGTGATCGTCTTAC 3267056
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| ||||||||||| ||||| | ||||||
Sbjct 3267055 CGGTGAGAGTCTTGACGAAAATCTGCAT 3267028
Score = 91.5 bits (100), Expect = 3e-13
Identities = 134/190 (71%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
||||| ||||| || |||||||| || || |||||||| |||| | || | |||||
Sbjct 3266783 AGGACGAGATGGAGTGTAGACTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGACCATCC 3266724
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || ||||||||||| | | ||||||||||| | || || ||||| ||
Sbjct 3266723 TCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGAGGAATACCCTCCTTATCC 3266664
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|| || || ||||| | || | |||| || || ||||| || ||||| ||
Sbjct 3266663 TGGATCTTCGACTTGACGTTGTCAATCGTGTCAGACGATTCAACTTCGAGCGTAATGGTC 3266604
Query 152073 TTGCCCGTGA 152082
||||||||||
Sbjct 3266603 TTGCCCGTGA 3266594
Score = 87.8 bits (96), Expect = 4e-12
Identities = 135/190 (71%), Gaps = 2/190 (1%)
Strand=Plus/Minus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
|||||| || || || || || || || |||||||||||||| | | || | |||||
Sbjct 3266501 GAGGACGAGGTGGAGCGTCGATTCCTTCTGGATGTTGTAATCAGACAGGGTGCGACCATC 3266442
Query 151952 TTCTAGGCTTTTCCCGGCGAAGAT-AAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010
|| || || ||||||||||| |||| | |||||||||| || ||| || ||||| |
Sbjct 3266441 CTCGAGCTGCTTGCCGGCGAAGATCAAGCGT-TGCTGGTCCGGCGGGATGCCCTCCTTGT 3266383
Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070
| || || || |||||| | || | | |||| ||| ||| || || | || || |
Sbjct 3266382 CCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCCAAGGTGATGG 3266323
Query 152071 TTTTGCCCGT 152080
| ||||| ||
Sbjct 3266322 TCTTGCCGGT 3266313
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153819898216931
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |