Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016- 05-11] 61 sequences; 38,464,024 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq1 159 7e-34 seq7 107 4e-18 seq11 96.9 7e-15 seq8 87.8 4e-12 >seq1 Length=5402283 Score = 159 bits (176), Expect = 7e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||| || ||||| |||| || | ||| ||| || || ||||||||||| | Sbjct 3267027 ACCGCCACGGAGACGAAGCACCAAGTGCAGGGTGGATTCCTTCTGAATGTTGTAGTCGGA 3266968 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 |||||| ||||| || || | || || || || ||||| | ||| || || || || Sbjct 3266967 AAGCGTACGGCCGTCTTCCAACTGCTTGCCTGCGAAGATGAGACGCTGCTGATCCGGAGG 3266908 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||||||||| ||||| | || ||| | ||||| || || || | ||||| Sbjct 3266907 AATACCCTCCTTGTCTTGAATCTTGGACTTCACGTTGTCGATGGTATCGGATGACTCGAC 3266848 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||||| ||||| ||||| || ||||| ||||| || || |||||||| Sbjct 3266847 TTCGAGGGTGATGGTCTTGCCGGTCAACGTCTTGACAAAGATCTGCAT 3266800 Score = 147 bits (162), Expect = 5e-30 Identities = 155/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| ||||| || || ||||| | || || || || ||||||||||| | Sbjct 3266799 ACCACCACGGAGGCGCAGGACGAGATGGAGTGTAGACTCCTTCTGAATGTTGTAGTCGGA 3266740 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||| |||||||| || || || ||||| |||||||| || || ||||| || Sbjct 3266739 CAGGGTGCGACCATCCTCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGAGG 3266680 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||| || |||||||| | || ||| | || || ||||| || | ||| || Sbjct 3266679 AATACCCTCCTTATCCTGGATCTTCGACTTGACGTTGTCAATCGTGTCAGACGATTCAAC 3266620 Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075 |||||| || || ||||| ||||| Sbjct 3266619 TTCGAGCGTAATGGTCTTGCCCGT 3266596 Score = 145 bits (160), Expect = 2e-29 Identities = 154/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| |||||||| || || || || | ||| ||| || ||||||||||| |||| Sbjct 3266515 CCACCGCGCAGGCGGAGGACGAGGTGGAGCGTCGATTCCTTCTGGATGTTGTAATCAGAC 3266456 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||| |||||||| || || || ||||| |||||||| ||||| ||||| ||| Sbjct 3266455 AGGGTGCGACCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGTTGCTGGTCCGGCGGG 3266396 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| |||||||| | || || | ||||| ||||| |||| || || Sbjct 3266395 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACC 3266336 Query 283053 TCGAGAGTGATCGTCTTACCCGT 283075 || | ||||| ||||| || || Sbjct 3266335 TCCAAGGTGATGGTCTTGCCGGT 3266313 Score = 143 bits (158), Expect = 6e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || |||||||| || || |||| || | || || || ||||| |||||||| | | Sbjct 3267254 CCGCCACGCAGACGGAGCACCAAGTGCAGGGTAGACTCCTTCTGGATATTGTAGTCGGAA 3267195 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 ||||| ||||| || || | || || || || ||||| | ||| || ||||| ||| Sbjct 3267194 AGCGTACGGCCGTCTTCCAACTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCCGGGGGA 3267135 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || |||||||| |||||||| | || || ||||||| ||||| || | || || Sbjct 3267134 ATGCCTTCCTTGTCCTGGATCTTCGACTTCACATTATCGATGGTGTCGGATGACTCCACC 3267075 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || |||||||||||||| || | |||||| ||||| |||||||| Sbjct 3267074 TCCAGTGTGATCGTCTTACCGGTGAGAGTCTTGACGAAAATCTGCAT 3267028 >seq7 Length=2328918 Score = 107 bits (118), Expect = 4e-18 Identities = 107/139 (77%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||||||| || |||| || | || || || |||||||||||||| | Sbjct 679314 ACCACCACGCAGGCGGAGGACCAAGTGGAGTGTCGACTCCTTCTGGATGTTGTAGTCGGA 679373 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||||||||| || || || ||||| ||||| | ||| || ||||| || Sbjct 679374 GAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGGGG 679433 Query 282992 AATACCCTCCTTGTCTTGG 283010 ||| |||||||||||| || Sbjct 679434 AATTCCCTCCTTGTCTGGG 679452 >seq11 Length=1384065 Score = 96.9 bits (106), Expect = 7e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || || ||||| ||||| |||| || | || || || |||||||||||||| | Sbjct 1031212 CCGCCGCGCAGACGAAGGACCAAGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 1031271 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||||||| ||||| || || || ||||| ||||||| || || ||||| ||| Sbjct 1031272 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGG 1031331 Query 282993 ATACCCTCCTTGTCTTGGATCTT 283015 || || |||||||| |||||||| Sbjct 1031332 ATGCCTTCCTTGTCCTGGATCTT 1031354 >seq8 Length=2222996 Score = 87.8 bits (96), Expect = 4e-12 Identities = 151/218 (69%), Gaps = 1/218 (0%) Strand=Plus/Minus Query 230187 GAAAAGGAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTC 230246 || ||||||||| | ||||| | || ||| || |||||||||| | ||| Sbjct 705383 GAGAAGGAGTTCCTCACTGACGCGCTGCCCTGCGCCCTGCTCGGCATGAACTCCACTCTT 705324 Query 230247 ATGGGGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAA 230306 ||| | || || ||||| ||||| || || || | || |||| || || || || Sbjct 705323 ATGTGCCAGTACATCGAGTTCGTCGCCGACCGCCTGCTCCTGGCTCTCGGCAACACCAAG 705264 Query 230307 GTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACT 230366 || || ||| | | |||||||||| || |||||| ||| || || || || || Sbjct 705263 GTCTACAACGCGACCAACCCCTTCGACTTCATGGAGAACATCTCGCTTGCCGGCAAGACC 705204 Query 230367 AACTTCTTCGAAAAGCGTGTCAGCGATTATCA-AAGGC 230403 ||||||||||| ||||| ||| ||||||| || ||||| Sbjct 705203 AACTTCTTCGAGAAGCGCGTCGGCGATTACCAGAAGGC 705166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046738381907894