Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016-
05-11] 61 sequences; 38,464,024 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq1 100 2e-16
seq11 86.0 5e-12
>seq1
Length=5402283
Score = 100 bits (110), Expect = 2e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||||| ||| || ||| ||||| || |||||||| |||| || || |||| ||
Sbjct 3267009 CACCAAGTGCAGGGTGGATTCCTTCTGAATGTTGTAGTCGGAAAGCGTACGGCCGTCTTC 3266950
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|| |||||| || || ||||| | |||||||||||| | ||| | ||| ||||| ||
Sbjct 3266949 CAACTGCTTGCCTGCGAAGATGAGACGCTGCTGATCCGGAGGAATACCCTCCTTGTCTTG 3266890
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||||| | | ||||| |||| || || || || | || || |||||
Sbjct 3266889 AATCTTGGACTTCACGTTGTCGATGGTATCGGATGACTCGACTTCGAGGGTGATGGTCTT 3266830
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || | ||||| || ||||| |||||
Sbjct 3266829 GCCGGTCAACGTCTTGACAAAGATCTGCAT 3266800
Score = 98.7 bits (108), Expect = 7e-16
Identities = 135/187 (72%), Gaps = 4/187 (2%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| ||||| ||||| |||||||||||||| | || ||| | || ||
Sbjct 3266497 ACGAGGTGGAGCGTCGATTCCTTCTGGATGTTGTAATCAGACAGGGTGCGACCATCCTCG 3266438
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| ||||| |||||||| || ||||| || | || | || ||||| |||
Sbjct 3266437 AGCTGCTTGCCGGCGAAGATCAAGCGTTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGG 3266378
Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
||||| ||| || ||| | |||||||||| || |||||||||| || || ||||
Sbjct 3266377 ATCTTGGACTTGACATTGT--CGATGGTGTCGGAAGACTCCACCTCCAAGGTGATGGTCT 3266320
Query 44307 TTCCCGT 44313
| || ||
Sbjct 3266319 TGCCGGT 3266313
>seq11
Length=1384065
Score = 86.0 bits (94), Expect = 5e-12
Identities = 94/125 (75%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||| ||| || || |||||| ||||||||||| |||| ||| ||| |||| ||
Sbjct 1031230 ACCAAGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCG 1031289
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| ||||| ||||||| |||||||| || | || | |||||||| |||
Sbjct 1031290 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCTTCCTTGTCCTGG 1031349
Query 44249 ATCTT 44253
|||||
Sbjct 1031350 ATCTT 1031354
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359990132369637
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |