Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016-
05-11] 61 sequences; 38,464,024 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq1 158 1e-33
seq11 143 2e-29
seq7 111 1e-19
>seq1
Length=5402283
Score = 158 bits (174), Expect = 1e-33
Identities = 175/230 (76%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
|||||| || ||||| | ||||| ||||| || ||||||||| || || ||||||||
Sbjct 3267255 GCCGCCACGCAGACGGAGCACCAAGTGCAGGGTAGACTCCTTCTGGATATTGTAGTCGGA 3267196
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
|| || || |||| || | ||||||||| ||||| || || ||||| ||||||| |||
Sbjct 3267195 AAGCGTACGGCCGTCTTCCAACTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCCGGGGG 3267136
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCA-ACGA-CGACACAGTGTCGCTCGACTCC 41812
|| || ||||||||| ||| || ||||| | | ||| |||||| ||||||
Sbjct 3267135 AATGCCTTCCTTGTCCTGGATCTTCGACTTCACATTATCGATG--GTGTCGGATGACTCC 3267078
Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||||||| || ||||| ||||| || || ||||| ||||||||||||||
Sbjct 3267077 ACCTCCAGTGTGATCGTCTTACCGGTGAGAGTCTTGACGAAAATCTGCAT 3267028
Score = 123 bits (136), Expect = 2e-23
Identities = 168/229 (73%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
||||| || ||||| | ||||| ||||| ||| |||||||||||||| ||||||||
Sbjct 3267026 CCGCCACGGAGACGAAGCACCAAGTGCAGGGTGGATTCCTTCTGAATGTTGTAGTCGGAA 3266967
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| || || |||| || | ||||||||| ||||| || || ||||| || |||| |||
Sbjct 3266966 AGCGTACGGCCGTCTTCCAACTGCTTGCCTGCGAAGATGAGACGCTGCTGATCCGGAGGA 3266907
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813
| | |||||||| | ||| | || | |||| ||| | | | || ||| ||||| |
Sbjct 3266906 ATACCCTCCTTGT-CTTGAATCTTGGACTTC-ACGTTGTCGATGGTATCGGATGACTCGA 3266849
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
| || | || || || || || |||| |||||| || || ||||||||
Sbjct 3266848 CTTCGAGGGTGATGGTCTTGCCGGTCAACGTCTTGACAAAGATCTGCAT 3266800
Score = 114 bits (126), Expect = 1e-20
Identities = 150/206 (73%), Gaps = 4/206 (2%)
Strand=Plus/Minus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| ||||| || || | || || || ||||| |||||||| ||||| || || ||
Sbjct 3266516 GCCACCGCGCAGGCGGAGGACGAGGTGGAGCGTCGATTCCTTCTGGATGTTGTAATCAGA 3266457
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
|||||||| | || |||||||||||||||||||| |||| ||| || ||||||| ||
Sbjct 3266456 CAGGGTGCGACCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGTTGCTGGTCCGGCGG 3266397
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCC 41812
| || |||||||||| ||| || ||| || | || | |||||| ||||||
Sbjct 3266396 GATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG--ATGGTGTCGGAAGACTCC 3266339
Query 41813 ACCTCCACCGTTATCGTTTTACCCGT 41838
||||||| || || || || || ||
Sbjct 3266338 ACCTCCAAGGTGATGGTCTTGCCGGT 3266313
Score = 114 bits (126), Expect = 1e-20
Identities = 111/143 (78%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || | || ||||| || || ||||||||||||||| ||||||||
Sbjct 3266798 CCACCACGGAGGCGCAGGACGAGATGGAGTGTAGACTCCTTCTGAATGTTGTAGTCGGAC 3266739
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|||||||| | || || ||||||||||||||||| |||| |||||| ||||||| |||
Sbjct 3266738 AGGGTGCGACCATCCTCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGAGGA 3266679
Query 41756 ACGCTCTCCTTGTCCATGATTTT 41778
| | |||||| ||| ||| ||
Sbjct 3266678 ATACCCTCCTTATCCTGGATCTT 3266656
>seq11
Length=1384065
Score = 143 bits (158), Expect = 2e-29
Identities = 118/144 (82%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||||||||| ||||| | |||| ||||| || ||||||||| ||||| ||||||||
Sbjct 1031211 GCCGCCGCGCAGACGAAGGACCAAGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 1031270
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
||||||||| |||| |||||||||||||||||||| ||||||||||| ||||||| ||
Sbjct 1031271 GAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGG 1031330
Query 41755 AACGCTCTCCTTGTCCATGATTTT 41778
| || ||||||||| ||| ||
Sbjct 1031331 GATGCCTTCCTTGTCCTGGATCTT 1031354
>seq7
Length=2328918
Score = 111 bits (122), Expect = 1e-19
Identities = 84/99 (85%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730
||||||||| ||||| ||||||||||||||||| | || ||||||||||| ||||||||
Sbjct 679350 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAA 679409
Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTC 41769
|| || ||||| ||||||| ||||| | |||||||||
Sbjct 679410 GATGAGACGCTGCTGGTCCGGGGGAATTCCCTCCTTGTC 679448
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462303647493200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |