Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphoma_20sp._20B47-9_20[genbank_20GCA_5F001748405.1_202016-08-29] 576 sequences; 38,548,368 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq230 125 2e-23 >seq230 Length=87271 Score = 125 bits (138), Expect = 2e-23 Identities = 181/253 (72%), Gaps = 2/253 (1%) Strand=Plus/Plus Query 230386 ATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC 230445 ||||| || || || || | | ||| ||||||||| | || ||| | || || ||| Sbjct 45536 ATCATCACTGAGGCCGTCGCGATCGAGAAGGAGTTCCTCACAGATGCTCTCCCCTG-CGC 45594 Query 230446 -CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 230504 || ||||||||||| ||| ||| ||| | |||||||| || || || || || ||| | Sbjct 45595 TCTGCTTGGCATGAACTCTGCACTCATGTGCCAGTACATTGAGTTTGTGGCTGATCGCCT 45654 Query 230505 TTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGA 230564 | | | | |||||| || | || |||||| | | |||||||| | || ||||| Sbjct 45655 TCTGCTGTCCCTTGGTAACAACAAGTACTACAACGCCACCAACCCCTTCGACTTCATGGA 45714 Query 230565 GCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAG 230624 | ||| || || || |||||||||||||| || ||||| ||| ||||||| |||| Sbjct 45715 GAACATCTCTCTGGCGGGCAAGACCAACTTCTTTGAGAAGCGCGTCGGTGACTACCAGAA 45774 Query 230625 GCCTGGTGTGATG 230637 | ||||||| ||| Sbjct 45775 GGCTGGTGTCATG 45787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057816193258880