Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphoma_20sp._20B47-9_20[genbank_20GCA_5F001748405.1_202016-08-29] 576 sequences; 38,548,368 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq230 109 5e-19 seq254 84.2 2e-11 seq20 84.2 2e-11 >seq230 Length=87271 Score = 109 bits (120), Expect = 5e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 119642 CTTGTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATT 119701 || ||| || || || || || ||||| || || ||||||||| | ||||| ||||| | Sbjct 45772 CTGGTAGTCACCGACGCGCTTCTCAAAGAAGTTGGTCTTGCCCGCCAGAGAGATGTTCTC 45713 Query 119702 CATAAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAG 119761 ||| || ||||| || || | | |||| | | ||||| || || | | || || Sbjct 45712 CATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTGTTGTTACCAAGGGACAGCAGAAG 45653 Query 119762 TCGATCTGCCACAAACTCGATGTATTCGCACATGGATTGC-GAATTCATGCCCAACATAG 119820 ||||| ||||||||||| ||||| | |||||| || ||| || |||||||| | || || Sbjct 45652 GCGATCAGCCACAAACTCAATGTACTGGCACAT-GAGTGCAGAGTTCATGCCAAGCAGAG 45594 Query 119821 CGACCGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTC 119869 || || | ||||| || | ||| ||||| || || |||| || || Sbjct 45593 CGCAGGGGAGAGCATCTGTGAGGAACTCCTTCTCGATCGCGACGGCCTC 45545 Score = 89.7 bits (98), Expect = 5e-13 Identities = 126/177 (71%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 120325 GCTCGATGATGTTAGTGTTCACGATGACGTCGGCGGCAGCGAAAAACGCGAGAACGTGCT 120384 |||||| | ||| ||| |||||| |||||| ||||||||| || ||||| ||||| Sbjct 45055 GCTCGACAAGGTTCTCGTTGACGATGCCGTCGGAGGCAGCGAAGAAAGCGAGGACGTGGG 44996 Query 120385 TAAGAAAAAATCGTTCTTTATCGTTCAGTTTTTTGTTCCAATCGTCAAAGTCCTTGGACA 120444 | || || || || | ||||| ||| ||||||||||||| || || ||||| | Sbjct 44995 AGATGAAGAAGCGCTCGTCGTCGTTGAGTCGCTTGTTCCAATCGTGAAGATCTTTGGAGA 44936 Query 120445 TGTCGATCTCTTCGACTTTCCAGTGACAATCGACCGCTTTCTTGTACGATTGCCAGA 120501 ||||||||| || | ||||| | | | || ||||||||| |||||||| Sbjct 44935 GGTCGATCTCCTCTGCGGTCCAGAAGGAGGCCTCGGCCTTCTTGTACATTTGCCAGA 44879 >seq254 Length=118772 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 26805 ATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGAC 26864 |||||| | || | || || |||||||||||| | ||||| ||||| ||| Sbjct 33255 ATCACCCTTGAGGTGGAGTCGTCCGACACCATCGACAATGTCAAGAGCAAGATCCAGGAC 33196 Query 26865 AAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGAT 26924 || || || || ||||| || || || | || || | || |||||| || || || ||| Sbjct 33195 AAGGAGGGTATCCCTCCGGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTTGAGGAT 33136 Query 26925 GATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGA 26984 | | | | | || |||||| ||||| || || || ||||| ||||||| ||||| | Sbjct 33135 GGTCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCTACACTCCATCTCGTCCTCCGC 33076 Query 26985 CTTAGAGGAGG 26995 ||| | ||||| Sbjct 33075 CTTCGTGGAGG 33065 >seq20 Length=105358 Score = 84.2 bits (92), Expect = 2e-11 Identities = 177/264 (67%), Gaps = 0/264 (0%) Strand=Plus/Plus Query 148617 ACATTCAGGCCGATGCCGCCTCCGTGTTTAGATATCATGGCACAATCGTTGAGTGTTTTA 148676 || || || || || ||||| || || || |||| ||||||| |||||||| | Sbjct 13133 ACGTTGAGACCAATACCGCCAGCGGTCTTGGAGATCAAGGCACAAGTCTTGAGTGTGTCG 13192 Query 148677 TAGATGCCGTTAATACTGTCCTCTTGAATGTTAAGCAGGTAGCACGATGACATTTGAGGC 148736 |||||||| | ||| |||||||| | |||| | ||| |||| || ||||||||||| Sbjct 13193 TAGATGCCATCAATGCTGTCCTCCTTCATGTCGATGAGGAAGCAGGACGACATTTGAGGA 13252 Query 148737 ATTTTCATGCCAGACGAAAATAGAGTTGGACTAGCGTGAGTGAACAGCTTTGCCCGCATC 148796 || |||| | || || || || |||||| ||||| |||| | ||| Sbjct 13253 TTTGGTGTGCCCGCATTGAAGAGGGTAGGCGAAGCGTGTGTGAAGTACTTTTGCGACATG 13312 Query 148797 AATCTATAGGATTCGATAGCGCTTTCGATGTCATCACCATGAATCTGTAGAGCTACACGC 148856 | || | || || || | ||||||| || ||||| || | ||| || ||| Sbjct 13313 TAGTCGTAAGTCTCAATCGCCTTCTCGATGTTCTCTCCATGGATGCCGACAGCCACGCGC 13372 Query 148857 ATCAGCATGTGTTGAGGCCTCTCG 148880 |||| ||||||||| || | |||| Sbjct 13373 ATCAACATGTGTTGTGGGCGCTCG 13396 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478658953630720