Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphoma_20sp._20B47-9_20[genbank_20GCA_5F001748405.1_202016-08-29] 576 sequences; 38,548,368 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq152 86.0 8e-12 >seq152 Length=430431 Score = 86.0 bits (94), Expect = 8e-12 Identities = 111/148 (75%), Gaps = 4/148 (3%) Strand=Plus/Plus Query 15050 CCCGAGATTGGCGACAAGTTTTGCTCTGGT-ATGGCGCAAAAGGGCACGTGCGGCATGAT 15108 ||||| | |||||||| || | |||| || |||| ||||||||||| ||| | || Sbjct 18783 CCCGAACTCGGCGACAAATTCTCCTCTCGTCATGGT-CAAAAGGGCACAACAGGCCTCAT 18841 Query 15109 TTTCCCCCAGGAAGACATGCCCTTTACCG-CGTCAGGCATGACGCCCGACATTATCATCA 15167 || ||| |||||||||||||| | || || | ||||| |||||||||| ||||| | Sbjct 18842 CGTCAACCAAGAAGACATGCCCTTCAACGACGAC-GGCATCTCGCCCGACATCATCATGA 18900 Query 15168 ACCCCAACTGCATCCCGTCCCGCATGAC 15195 |||| || | |||| || |||||||| Sbjct 18901 ACCCACACGGTTTCCCCTCGCGCATGAC 18928 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611387597977600