Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphoma_20sp._20B47-9_20[genbank_20GCA_5F001748405.1_202016-08-29] 576 sequences; 38,548,368 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq230 129 1e-24 >seq230 Length=87271 Score = 129 bits (142), Expect = 1e-24 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 || ||||| || | ||||||| |||||||||| ||||||||||||||||||||| ||| Sbjct 45750 TCAAAGAAGTTGGTCTTGCCCGCCAGAGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTG 45691 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 || ||||| | |||| | ||||| | | | | ||| || ||||||||||| | Sbjct 45690 GCGTTGTAGTACTTGTTGTTACCAAGGGACAGCAGAAGGCGATCAGCCACAAACTCAATG 45631 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 ||||| | ||| ||| ||||||||||||||| || | || || | || || || | Sbjct 45630 TACTGGCACATGAGTGCAGAGTTCATGCCAAGCAGAGCGCAGGGGAGAGCATCTGTGAGG 45571 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTC 251768 || ||||| ||| | || || ||||| Sbjct 45570 AACTCCTTCTCGATCGCGACGGCCTC 45545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027829214564416