Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphoma_20sp._20B47-9_20[genbank_20GCA_5F001748405.1_202016-08-29] 576 sequences; 38,548,368 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq230 113 1e-19 >seq230 Length=87271 Score = 113 bits (124), Expect = 1e-19 Identities = 176/252 (70%), Gaps = 0/252 (0%) Strand=Plus/Plus Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561 |||||||| || || || | | ||| ||||| ||| | || ||| | || ||| Sbjct 45536 ATCATCACTGAGGCCGTCGCGATCGAGAAGGAGTTCCTCACAGATGCTCTCCCCTGCGCT 45595 Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621 || ||||||||||||||| ||||||| | |||||||| || || || || || ||| || Sbjct 45596 CTGCTTGGCATGAACTCTGCACTCATGTGCCAGTACATTGAGTTTGTGGCTGATCGCCTT 45655 Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681 | | | |||||| | | || |||||| ||| |||||||| | ||| |||||| Sbjct 45656 CTGCTGTCCCTTGGTAACAACAAGTACTACAACGCCACCAACCCCTTCGACTTCATGGAG 45715 Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGC 243741 ||| || || || || || |||||||| || ||||| ||| |||| || || Sbjct 45716 AACATCTCTCTGGCGGGCAAGACCAACTTCTTTGAGAAGCGCGTCGGTGACTACCAGAAG 45775 Query 243742 CCTGGTGTGATG 243753 ||||||| ||| Sbjct 45776 GCTGGTGTCATG 45787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102871860745600