Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphoma_20sp._20B47-9_20[genbank_20GCA_5F001748405.1_202016-08-29] 576 sequences; 38,548,368 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq230 185 9e-42 seq275 116 4e-21 seq254 116 4e-21 seq241 111 2e-19 >seq230 Length=87271 Score = 185 bits (204), Expect = 9e-42 Identities = 207/276 (75%), Gaps = 3/276 (1%) Strand=Plus/Minus Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226 |||||||||||||||| || || | |||||||| ||||||||||| ||| || || Sbjct 45162 GTAGGTGTCGATGAGGAGAGAGTATGTCTCCGAGTGGACGTTCTCCATCATGATCTGGAA 45103 Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATT 133286 |||||| ||||| |||||||| | || ||||| | ||| |||||||| || || Sbjct 45102 GCCGTAGAAGCATCGCGCCTCAGGTATTTGTACTTCGCCGGAGAAGCGCTCGACAAGGTT 45043 Query 133287 TTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCG 133346 |||||||||||||||||| ||| ||||| || || || ||||| |||||| ||| Sbjct 45042 CTCGTTGACGATGCCGTCGGAGGCAGCGAAGAAAGCGAGGACGTGGGAGATGAAGAAGCG 44983 Query 133347 CTCGTTGTCGTTCAAGCGC---TCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTC 133403 ||||| |||||| | ||| | ||| ||| | || ||||| ||||| | |||||| Sbjct 44982 CTCGTCGTCGTTGAGTCGCTTGTTCCAATCGTGAAGATCTTTGGAGAGGTCGATCTCCTC 44923 Query 133404 GACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 ||||||| || || |||||||| || |||||||| Sbjct 44922 TGCGGTCCAGAAGGAGGCCTCGGCCTTCTTGTACAT 44887 >seq275 Length=365033 Score = 116 bits (128), Expect = 4e-21 Identities = 106/134 (79%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396 ||||| ||||| |||||| | ||||| ||||| ||||| | ||| ||||| ||||| || Sbjct 273731 GACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAG 273790 Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456 || | ||||||||| ||||||||||||||| ||||| |||| ||||| ||||| || Sbjct 273791 GATGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTGCACTTGGTCCTC 273850 Query 38457 CGTTTGAGAGGCGG 38470 ||| || | || || Sbjct 273851 CGTCTGCGTGGAGG 273864 >seq254 Length=118772 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| || ||||| | || || ||| | | Sbjct 32780 ATGCAGATCTTCGTCAAGACACTCACTGGCAAGACTATCACATTGGAGGTTGAGTCTTCA 32721 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | || |||| | || || || | ||||| ||||| |||||| | || || Sbjct 32720 GACACGATTGACAACG-TGAAGTCGAAGATTCAGGACAAGGAGGGTATTCCCCCGGATCA 32662 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||||| || ||||| ||||| || |||| || || ||| |||||||| Sbjct 32661 GCAGCGACTCATTTTTGCTGGCAAGCAGCTCGAAGACGGCCGTACTCTCTCAGACTACAA 32602 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| ||||| | || || || |||||||| ||| || | || || Sbjct 32601 CATCCAGAAGGAGTCCACTCTCCACTTGGTGCTCCGTCTGCGTGGTGG 32554 Score = 100 bits (110), Expect = 3e-16 Identities = 140/193 (73%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 38268 ACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAAGA 38326 || ||||| ||||||||| | || || ||| | |||||| | | | || | | |||| Sbjct 33267 ACCGGCAAGACCATCACCCTTGAGGTGGAGTCGTCCGACACCATCGACAATG--TCAAGA 33210 Query 38327 AAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCA 38385 || |||| ||||| ||||| || || | ||||| ||||| || || | ||| |||| Sbjct 33209 GCAAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAGCAGCGCCTGATCTTCGCCGGCA 33150 Query 38386 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGC 38445 | ||||| || || | ||||||||| ||||||||||||||| ||||| | || || | Sbjct 33149 AGCAGCTTGAGGATGGTCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCTACACTCC 33090 Query 38446 ATTTGGTGCTGCG 38458 || | || || || Sbjct 33089 ATCTCGTCCTCCG 33077 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/194 (72%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAA 38324 |||| ||||| ||||||||| | || || ||| | |||| | | | |||| | || Sbjct 32986 TCACCGGCAAGACCATCACCCTTGAGGTTGAGTCATCCGATACGATCGACAACG-TCAAG 32928 Query 38325 GAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGC 38384 ||| || | || || ||||| || || | ||||| ||||| | |||| ||| ||| Sbjct 32927 TCAAAGATTCAGGATAAGGAGGGCATCCCTCCGGACCAGCAGCGCTTGATTTTCGCCGGC 32868 Query 38385 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTG 38444 || ||||| || || | || |||||| ||| |||||||||||||||||| | || || Sbjct 32867 AAGCAGCTCGAGGATGGCCGTACCCTCTCCGATTACAACATCCAAAAGGAATCCACTCTA 32808 Query 38445 CATTTGGTGCTGCG 38458 ||| | || ||||| Sbjct 32807 CATCTCGTCCTGCG 32794 >seq241 Length=242151 Score = 111 bits (122), Expect = 2e-19 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAAG 38325 |||| ||||| || |||||| |||| || ||| | |||||| | | | | | || Sbjct 46659 TCACCGGCAAGACGATCACCCTCGAGGTGGAGTCGTCCGACACCATCGACAATGTCAAGT 46718 Query 38326 AAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCA 38385 || |||| ||||| ||||| |||||| | ||||| ||||| | || | ||| |||| Sbjct 46719 CCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCTTGATCTTCGCCGGCA 46778 Query 38386 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGC 38445 | ||||| || |||| ||||| || ||||||||||||||| ||||| | ||||| | Sbjct 46779 AGCAGCTCGAGGACGGCCGCACTCTGTCCGACTACAACATCCAGAAGGAGTCAACGCTCC 46838 Query 38446 ATTTGGTGCTGCGT 38459 | ||||| || ||| Sbjct 46839 ACTTGGTCCTCCGT 46852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500169198755840