Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphoma_20sp._20B47-9_20[genbank_20GCA_5F001748405.1_202016-08-29] 576 sequences; 38,548,368 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq254 95.1 8e-15 >seq254 Length=118772 Score = 95.1 bits (104), Expect = 8e-15 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | ||| || ||||| ||||| ||||| || || | || | || || Sbjct 32572 ACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCTGAGAGAGTACGGCCGTCTTCG 32631 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || ||||| || ||||| ||||| || | || | ||||||||||| | Sbjct 32632 AGCTGCTTGCCAGCAAAAATGAGTCGCTGCTGATCCGGGGGAATACCCTCCTTGTCCTGA 32691 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 |||||| || ||| | |||| || | |||||| || | || || || || Sbjct 32692 ATCTTCGACTTCACGTTGTCAATCGTGTCTGAAGACTCAACCTCCAATGTGATAGTCTTG 32751 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || ||||| ||||| || |||||||||||| Sbjct 32752 CCAGTGAGTGTCTTGACGAAGATCTGCATA 32781 Score = 82.4 bits (90), Expect = 5e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | ||| || |||||||| || ||||| || |||| | || ||| Sbjct 32344 ACCAAGTGCAGTGTCGACTCCTTCTGAATATTGTAGTCGCTGAGCGTTCGGCCGTCTTCC 32403 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 | ||| || || || || || || || |||||||| |||| | ||||||||||| Sbjct 32404 AACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGCGGGATACCCTCCTTGTCTTGG 32463 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 |||||| ||| ||| | || | || | | || || || | || || || || Sbjct 32464 ATCTTCGATTTCACGTTGTCGATGGTATCGCTCGATTCGACTTCCAATGTGATAGTCTTG 32523 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || |||||||| |||||||| |||||| Sbjct 32524 CCAGTAAGAGTCTTGACAAAGATTTGCATA 32553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324631321072128