Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphoma_20sp._20B47-9_20[genbank_20GCA_5F001748405.1_202016-08-29] 576 sequences; 38,548,368 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq257 86.0 5e-11 >seq257 Length=526535 Score = 86.0 bits (94), Expect = 5e-11 Identities = 126/178 (71%), Gaps = 3/178 (2%) Strand=Plus/Plus Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 || || || || || || || ||||| || ||||||||||| || |||||||| | || Sbjct 133308 ACCGTCCCCGCCTACTTCAACGACTCCCAGCGTCAAGCTACCAAGGATGCTGGTCTCATC 133367 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 ||||| || || || || ||||| ||||| || || || || ||||| | || || || Sbjct 133368 GCTGGTCTCAACGTCCTCCGTATCATCAACGAGCCCACCGCCGCTGCCATCGCCTACGGT 133427 Query 550529 CTTGATAAACATAATGATCAAGAACTTAATGTACTCATCTTTGATT---GTGGAGGTA 550583 ||||| || | | || | || | || || |||||||| || | |||| |||| Sbjct 133428 CTTGACAAGAAGACTGTTGGCGAGCGCAACGTCCTCATCTTCGACTTGGGTGGTGGTA 133485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029265538522240