Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paraphoma_20sp._20B47-9_20[genbank_20GCA_5F001748405.1_202016-08-29]
576 sequences; 38,548,368 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq254 100 2e-16
seq241 86.0 5e-12
>seq254
Length=118772
Score = 100 bits (110), Expect = 2e-16
Identities = 153/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| || | |||||| || || ||| ||| || || || ||||| || || ||| | ||
Sbjct 32563 AGACGGAGCACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCTGAGAGAGTACGG 32622
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
|||| || | |||||| || ||||| || |||||||| ||||||| ||||| ||||||
Sbjct 32623 CCGTCTTCGAGCTGCTTGCCAGCAAAAATGAGTCGCTGCTGATCCGGGGGAATACCCTCC 32682
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| |||||| || || | | | ||||| | ||| ||||||| ||
Sbjct 32683 TTGTCCTGAATCTTCGACTTCACGTTGTCAATCGTGTCTGAAGACTCAACCTCCAATGTG 32742
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || || || || | || || || || ||||||||
Sbjct 32743 ATAGTCTTGCCAGTGAGTGTCTTGACGAAGATCTGCAT 32780
>seq241
Length=242151
Score = 86.0 bits (94), Expect = 5e-12
Identities = 130/185 (70%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617
||||| || ||||| ||| || || || ||||| || || ||| | || |||| ||
Sbjct 46845 ACCAAGTGGAGCGTTGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCGTCCTCG 46786
Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677
| |||||| ||||| || |||| ||||| || |||| ||||| ||||||||||||
Sbjct 46785 AGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGG 46726
Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737
||||| || ||| | | | || |||| ||||||||| | || ||||| ||
Sbjct 46725 ATCTTGGACTTGACATTGTCGATGGTGTCGGACGACTCCACCTCGAGGGTGATCGTCTTG 46666
Query 48738 CCCGT 48742
|| ||
Sbjct 46665 CCGGT 46661
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380934925818048
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |