Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphoma_20sp._20B47-9_20[genbank_20GCA_5F001748405.1_202016-08-29] 576 sequences; 38,548,368 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq20 324 2e-83 seq230 150 2e-31 seq367 87.8 2e-12 >seq20 Length=105358 Score = 324 bits (358), Expect = 2e-83 Identities = 1128/1740 (65%), Gaps = 33/1740 (2%) Strand=Plus/Minus Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270 |||||| ||||||| ||||| || || |||||||||| || || |||| || | Sbjct 13390 CCCACAACACATGTTGATGCGCGTGGCTGTCGGCATCCATGGAGAGAACATCGAGAAGGC 13331 Query 75271 CTTGGAGACATACGACAAGATGTCCCAAG-GTATGTTCATTCACGCAACACCAACCCTCT 75329 | ||||| |||||| | ||||| ||| ||| |||| ||||| | || ||||||| Sbjct 13330 GATTGAGACTTACGACTACATGTCGCAAAAGTAC-TTCACACACGCTTCGCCTACCCTCT 13272 Query 75330 TCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 75389 ||||||| || ||||||| || || ||||| |||||||| |||| || ||||||| Sbjct 13271 TCAATGCGGGCACACCAAATCCTCAAATGTCGTCCTGCTTCCTCATCGACATGAAGGAGG 13212 Query 75390 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 75449 || || | || ||||| | || || | | ||||| ||||| ||| |||| Sbjct 13211 ACAGCATTGATGGCATCTACGACACACTCAAGACTTGTGCCTTGATCTCCAAGACCGCTG 13152 Query 75450 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 75509 | |||||||| | || | || | | | |||| | ||| || | || || | Sbjct 13151 GCGGTATTGGTCTCAACGTTCACCGTATCCGTGCCACTGGCTCTTACATCGGTGGCACCA 13092 Query 75510 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 75569 ||||| ||| | ||| | ||||| |||||||| || | ||| ||| || || |||| Sbjct 13091 ATGGTACATCGAACGGTCTCATTCCCATGCTTCGTGTCTACAACAACACGGCTCGTTATG 13032 Query 75570 TAAATCAAGCGGGGCGTC----GCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCAT 75625 | |||||| | ||| | || || || |||| ||||| |||| ||||||||| Sbjct 13031 TTGATCAAG-GTGGCAACAAGCGCCCTGGCGCCTTCGCCATCTACCTGGAGCCATGGCAT 12973 Query 75626 GCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGT 75685 || ||| || | | |||||||| | || ||||| || | || || | ||| Sbjct 12972 GCTGATGTCTTCGGTTTCCTTGATCTTCGCAAGAACCATGGCAAAGAGGAAGTTCGTGCC 12913 Query 75686 AGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGT 75745 | || ||||| | | || |||||||||||||||||||||||||| ||| ||||| | Sbjct 12912 CGTGACCTCTTCTACGCACTATGGATTCCAGACCTTTTCATGAAGCGCGTTCAGGAGAAT 12853 Query 75746 GGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAG 75805 ||| | ||| | || ||||| || || | || || ||||| |||||| | ||||| Sbjct 12852 GGTGAGTGGACGCTATTCTGCCCCAACGAAGCCCCTGGTCTTGCCGACGTGTATGGTGAT 12793 Query 75806 GAGTTTGAAGCCCTCTACACAAAG-TATGAAGAGGAGGGTAGAGCCAATGCGACTGTACC 75864 ||||| || | |||||| || | || ||| || | | | |||||| | Sbjct 12792 GAGTTCGAGGAGCTCTAC-CATCGTTACGAACGTGACAACCGTGGTCGGGAGACTGTTCG 12734 Query 75865 AGCCGCCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATAT 75924 ||| | | ||| | || || || | | |||||||||||||| | || | || Sbjct 12733 CGCCCAAAAGCTCTGGTATGCCATCCTTGAGGCTCAGACGGAGACTGGTAACCCTTTCAT 12674 Query 75925 GCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAG 75984 ||| ||||| |||||||| ||| |||||| |||||||||||| | || || || || Sbjct 12673 GCTCTACAAAGATGCTTGCAACCGGAAGAGCAACCAAAAGAATCTTGGTACCATTCGCAG 12614 Query 75985 CTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAA 76044 ||| || || ||||| || || | |||||||| | | |||||| || || || || Sbjct 12613 CTCTAACCTCTGCACCGAGATCGTCGAGTACACTGCTCCTGATGAGGTAGCGGTATGTAA 12554 Query 76045 TTTGGCATCAATCGCCCTTCCAAAGTATGT---CAATGAAGAGACTCGCACTTTTGATTA 76101 | || || |||| || || || || | || ||| | | | | ||||| | Sbjct 12553 CCTCGCCTCGCTCGCGCTCCCCTCGTTCGTGGACTAT-AAGCG-CGGGGA-GTTTGACTT 12497 Query 76102 TGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAG 76161 | ||||| || ||| |||| | |||||||| || | ||| |||| || Sbjct 12496 CAACAAACTCCACGAAGTCACCCAAGTTGTTACCCGCAACTTGAACAAGATCATCGAAGT 12437 Query 76162 AAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTT 76221 || || || || ||| || || ||| | || ||||||||||| || | Sbjct 12436 CAACCACTACCCAGTAGAGGAAGCACGTCGCAGCAATTTCCGTCACAGACCTATCGGGCT 12377 Query 76222 GGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATGA 76281 |||||||| |||||||| |||| || | |||| | || || || || Sbjct 12376 CGGTGTTCAGGGTCTCGCTGATGCCTTCCTGGCACTACGCTTGCCCTTCGAGTCGCCCGA 12317 Query 76282 AGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAG 76341 |||||| || | || | ||||| || ||||| || ||||| |||| | Sbjct 12316 GGCCAAGAAGCTCAACATCCAGATCTTCGAGACCATCTACCACGCGGCCCTCACCTCATC 12257 Query 76342 TTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCA 76401 ||| || | ||| | | | || | || | ||||| || |||||||| ||||| Sbjct 12256 TTGCGACATTGCTAAGGAGCTGGGCCCTTACGCGACATACGAAGGTTCTCCTATCTCCCA 12197 Query 76402 AGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAACTACGACTGGGAT-- 76459 ||| |||||||| || ||| |||| || | ||| | || | || ||||||| Sbjct 12196 AGGCCAGCTTCAGTACGACCTGT-GGAACGTCACACCCA-CTGATCT----CTGGGATTG 12143 Query 76460 GTTCTC----AAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACC 76515 | ||| ||||| ||| || | || |||| || ||||||| | ||||| Sbjct 12142 GGCCTCGCTGAAGGACAAGATCGCACAGCACGGCGTTCGCAATTCTCTTTTGGTTGCACC 12083 Query 76516 AATGCCAACAGCCTCCACCGCACA-AATCTTGGGTAATAATGAATGCTTTGAACCATACA 76574 ||||| || || || || | || | ||||||| ||||| || ||||| || || |||| Sbjct 12082 CATGCCGACCGCATCTACGTCTCAGATTCTTGGG-AATAACGAGTGCTTCGAGCCCTACA 12024 Query 76575 CAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGCACC 76634 | ||||||||||| | | || || || |||||| | |||||| | Sbjct 12023 CGTCAAACATCTACTCTCGCCGTGTGCTGGCCGGCGAGTTTCAAGTCGTCAACCCCTGGC 11964 Query 76635 TCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGA 76694 || | || || ||| | || || || ||||| || | |||||| | | || | Sbjct 11963 TCTTGAAAGATCTCGTTGACATGGGACTGTGGTCTGAGAACATGAAGAACCGTATCATCG 11904 Query 76695 AAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGAATCTCTACC 76754 | || ||||||||||| | || | | ||||| || || | |||| ||| ||| Sbjct 11903 CCGATGGCGGTTCCATTCAGAGGATTCCCAACATCCCTGAAGAGACGAAGACTCTGTACA 11844 Query 76755 GCACAGTGTGGGAAATCAAGATGAAAGATGTCATTGACATGGCCGCAGATCGTGGTCGCT 76814 ||||||||||| ||| | | |||| | ||||| || || |||||| | Sbjct 11843 AGACAGTGTGGGAGATCTCGCAGCGCACCATCATCCAGATGGCTGCCGACCGTGGTGCGT 11784 Query 76815 TCATTGATCAAAGTCAAAGT--ATGAATCTATTCATGGAAAGTCCAACGATGTCCAAGCT 76872 |||| || | |||| ||| |||| | |||| | || || ||| |||| | Sbjct 11783 TCATCGACC--AGTCTCAGTCCTTGAACATTCACATGAAGGAGCCGACCATGGGCAAGAT 11726 Query 76873 CTCTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATGTACTATCTCCG 76932 | |||| |||||| | || ||||| | ||||| || || ||||||||||||||||| Sbjct 11725 CACTTCGATGCATTTTGCCGGCTGGAAGCTTGGGCTGAAGACTGGAATGTACTATCTCCG 11666 >seq230 Length=87271 Score = 150 bits (166), Expect = 2e-31 Identities = 351/519 (68%), Gaps = 14/519 (3%) Strand=Plus/Plus Query 65005 ACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTT-TGACACAAAGTC 65063 || || ||||| ||| |||||||| | ||||| | |||||| | | | |||| | Sbjct 45257 ACAGTTCCATGCATTCGCAAGAAGGCTGACTGGGCCCTCAAATGGATCTCAGACAAGAAC 45316 Query 65064 TCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGG 65123 ||| |||||||| | || || | || || || || ||||| ||||||||| ||| Sbjct 45317 TCGA-CCTTCGCCAACCGTCTGGTCGCATTCGCCGCCGTTGAGGGCATCTTCTTCAGCGG 45375 Query 65124 GTCATTCTGCG-CTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCT 65182 || ||| ||| | || | |||||||||||||| || || ||||| || || |||| Sbjct 45376 CTCGTTC-GCGTCCATCTTCTGGTTGAAGAAGCGTGGCCTGATGCCCGGTCTCACATTCT 45434 Query 65183 CAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCA 65242 |||| || || || || || || ||||| | ||| || |||||| || ||| || Sbjct 45435 CAAACGAGCTGATCTCTCGCGACGAGGGCATGCACACTGACTTTGCC-TG--CCTCCTCT 45491 Query 65243 AGACTTTGCGTAATA---GACCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGG 65299 || | | || | | |||| || || | |||| |||||| | | ||||| | Sbjct 45492 TCTCTCTCCTCAACACACGCCCCAGTAAGGATGCCGTCCAGGCCATCATCACTGAGGCCG 45551 Query 65300 TTGAGATTGAGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACT 65359 | | ||| ||||| | |||| || || || ||||| || ||| | || ||||||| Sbjct 45552 TCGCGATCGAGAAGGAGTTCCTCACAGATGCTCTCCCCTGCGCTCTGCTTGGCATGAACT 45611 Query 65360 CTGAGAAGATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGG 65419 ||| |||| | |||||||||||| |||| | ||||| || || || || Sbjct 45612 CTGCACTCATGTGCCAGTACATTGAGTTTGTGGCTGATCGCCTTCTGCTGTCCCTT--GG 45669 Query 65420 TGCCACCCATT--TGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGA 65477 | || | | | | ||||| | || || || ||||| ||||| ||||| || | Sbjct 45670 TAACAACAAGTACTACAACGCCACCAACCCCTTCGACTTCATGGAGAACATCTCTCTGGC 45729 Query 65478 TGGGAAGACCAACTTCTTTGAGAAGCGAGTTGGGGACTA 65516 || ||||||||||||||||||||||| || || ||||| Sbjct 45730 GGGCAAGACCAACTTCTTTGAGAAGCGCGTCGGTGACTA 45768 >seq367 Length=109793 Score = 87.8 bits (96), Expect = 2e-12 Identities = 160/228 (70%), Gaps = 6/228 (3%) Strand=Plus/Plus Query 175275 TGGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCT 175334 |||||| |||||||| || || || ||||| | || ||| ||||| || ||||| || Sbjct 23804 TGGTGCGAAGATCCCTCGTGGAGCGATTCTCTCCGGCCCGCCCGGTACTGGTAAGACGCT 23863 Query 175335 CCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATCCAGTG-CTCTGCCGCAA 175393 ||||||| ||||| || || || || || |||||| || |||| | || | Sbjct 23864 CCTCGCCAAAGCCACTGCCGGCGAGTCTGGCGTGCCATTCTTC-AGTGTCAGTGGTTCTG 23922 Query 175394 ACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCG 175453 | || || ||||||||||| ||||| |||||| | || || || || || | | | Sbjct 23923 AATTCGTAGAGATGTTTGTCGGTGTCGGTGCCTCGCGTGTGCGTGACCTGTTCGCCAATG 23982 Query 175454 CCCGCGAAA-ATCA-ACCATGTATTGTCTTCATTGATGAGATTGATGC 175499 ||||||| | || ||| || || |||||||||| || ||||| || Sbjct 23983 --CGCGAAAGAGCACACCCTGCATCATCTTCATTGACGAAATTGACGC 24028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596565304698880