Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphoma_20sp._20B47-9_20[genbank_20GCA_5F001748405.1_202016-08-29] 576 sequences; 38,548,368 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq303 118 9e-22 >seq303 Length=251182 Score = 118 bits (130), Expect = 9e-22 Identities = 212/308 (69%), Gaps = 4/308 (1%) Strand=Plus/Minus Query 34318 TCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGC 34377 || ||||| ||||| | || | | || | || |||||| |||||| || || || Sbjct 207457 TCGGTCTCGGGGTTCTTGCACTTCTTGCAGAGAACGAACTTGGAGATGAAGCCGTCGAGA 207398 Query 34378 AGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAA 34437 |||||| | ||| || |||||||| |||||||| ||| | || |||| ||| | Sbjct 207397 TAGTCCTGGAGCTTGCTGGCGTCGTGGGCGCCGTTGATGATCCAGCGGTCGTCATTGGGA 207338 Query 34438 TCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTT--TGTCGGGTAAATGGCCG 34495 | | | || || || || |||||| | ||||||||||| || || | | || | Sbjct 207337 TTGGTGTTGGTCTGGGCCCCGAGCTCGAAGCCGAAGTACTTGATGACGTGAGCAGGG--G 207280 Query 34496 GACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGC 34555 | || | || | || ||| | | | |||||| ||||| |||||||||||||||| Sbjct 207279 GGCGAGCGAGTGACTGGGCCACGCTGCTGAGGTTGACAATGACGGTCTTGATGCCGTTGC 207220 Query 34556 CCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCA 34615 | || || || | ||||| || |||| ||| |||||||||||||| | ||| || | Sbjct 207219 CTTTGCCCTCAATCTTGGACTGGAGGCGCTCCATCTTGTAGCGGTAGAAGGAGTCGGCGA 207160 Query 34616 CATTGCGG 34623 ||| |||| Sbjct 207159 CATCGCGG 207152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412838701851968