Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphoma_20sp._20B47-9_20[genbank_20GCA_5F001748405.1_202016-08-29] 576 sequences; 38,548,368 total letters Query= NC_023423.1 Length=610033 Score E Sequences producing significant alignments: (Bits) Value seq354 91.5 6e-13 >seq354 Length=75842 Score = 91.5 bits (100), Expect = 6e-13 Identities = 147/205 (72%), Gaps = 6/205 (3%) Strand=Plus/Minus Query 309643 ACCCTCTCGCCCCTCAA-AGCTCCAACCTTCGATGCGACAATCTCCATCAACTTGGCGAT 309701 ||||||| |||| || ||| || || || || || | ||| | ||| | ||| || Sbjct 68345 ACCCTCTTGCCCTGTAATAGCCCCGACTTTGGACAAGAGACACTCGACCAAATGGGCAAT 68286 Query 309702 AGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTCAGGTCTCATTCCGGTGAT 309761 |||||||| || |||||||| |||||||||||| | || || ||| ||| | | Sbjct 68285 TGTCATACGGGATGGAATGGCGTGAGGGTTGATGATCAGATCTGGCGTCAGTCC-TTCTT 68227 Query 309762 TGGGTTGAAAGGCATATCTTCTT-CAGGTACAATCAAACCAATAGTTCCCTTTTGAGCGT 309820 ||| |||||||||| ||||||| | | || | | |||||| || || || ||| ||| Sbjct 68226 TGG--TGAAAGGCATGTCTTCTTGCCGATA-GGTGATACCAATGGTACCTTTCTGACCGT 68170 Query 309821 GCCTGGAAGCAAACTTGTCACCAAT 309845 | | || |||||||| |||||||| Sbjct 68169 GACGAGACGCAAACTTATCACCAAT 68145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1951959994428928