Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphoma_20sp._20B47-9_20[genbank_20GCA_5F001748405.1_202016-08-29] 576 sequences; 38,548,368 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq230 87.8 2e-12 >seq230 Length=87271 Score = 87.8 bits (96), Expect = 2e-12 Identities = 241/366 (66%), Gaps = 9/366 (2%) Strand=Plus/Plus Query 50364 GGCATAATGCCCGGCCTCACGTTTAGCAACGAGTTGATTTCGCGCGACGAAGGAATGCAC 50423 ||| | |||||||| ||||| || |||||| |||| || |||||||| || |||||| Sbjct 45410 GGCCTGATGCCCGGTCTCACATTCTCAAACGAGCTGATCTCTCGCGACGAGGGCATGCAC 45469 Query 50424 ACAGACTTTGCGTGTTTGTACTACAATACGCGCGTAA-ATGAAAAATTATCATACGAAAC 50482 || |||||||| || | || | | | | | | | | || | || | Sbjct 45470 ACTGACTTTGCCTGCCTCCTCTTCTCTCTCCTCAACACACGCCCCAGTA----AGGATGC 45525 Query 50483 AATTTTGGACATGTTCAAAGAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTT 50542 | || ||| ||| || ||||||| ||||| || ||||| |||| || ||| | Sbjct 45526 CGTCCAGGCCATCATCACTGAGGCCGTCGCGATCGAGAAGGAGTTCCTCACAGATGCTCT 45585 Query 50543 ACCCGTGGCATTGTTGGGCATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGTTGC 50602 ||| || || | ||||||||| | | | |||||| |||||||||||||||| || Sbjct 45586 CCCCTGCGCTCTGCTTGGCATGAACTCTGCACTCATGTGCCAGTACATTGAGTTTGTGGC 45645 Query 50603 AGACAGATTGTTGTTGCAGCTGGG--ACAACCGAAATACTATAATGCACGTAACCCCTTT 50660 || | | || || || || ||||| || ||||| || || |||||||| Sbjct 45646 TGATCGCCTTCTGCTGTCCCTTGGTAACAAC--AAGTACTACAACGCCACCAACCCCTTC 45703 Query 50661 CCGTTTATGAATAACATATCGTTGGAGGGCAAAACAAACTTTTTCGAAAGACGTGTAGGC 50720 || ||| | ||||| || ||| |||||| || ||||| || || | || || || Sbjct 45704 GACTTCATGGAGAACATCTCTCTGGCGGGCAAGACCAACTTCTTTGAGAAGCGCGTCGGT 45763 Query 50721 GAATAC 50726 || ||| Sbjct 45764 GACTAC 45769 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488540482483200