Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphoma_20sp._20B47-9_20[genbank_20GCA_5F001748405.1_202016-08-29] 576 sequences; 38,548,368 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq241 118 1e-21 seq254 109 5e-19 >seq241 Length=242151 Score = 118 bits (130), Expect = 1e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | ||||| || | ||| |||||| || |||||||| |||| | Sbjct 46863 CCACCACGGAGACGGAGGACCAAGTGGAGCGTTGACTCCTTCTGGATGTTGTAGTCGGAC 46804 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || |||| || |||||||| || || || ||||| ||||||||||||| ||| Sbjct 46803 AGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGGGGA 46744 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | || |||||||||| |||||| ||| | | | | | |||||| ||| |||||| Sbjct 46743 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGACGACTCCACC 46684 Query 35690 TCCACCGTGATCGTTTTACCCGT 35712 || | |||||||| || || || Sbjct 46683 TCGAGGGTGATCGTCTTGCCGGT 46661 >seq254 Length=118772 Score = 109 bits (120), Expect = 5e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 35509 TCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGC 35568 ||||||||| | | | |||||| || | || |||||| ||||| ||||| ||| Sbjct 32325 TCCACCACGCAGGCGGAGCACCAAGTGCAGTGTCGACTCCTTCTGAATATTGTAGTCGCT 32384 Query 35569 CAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGG 35628 | ||||| |||| |||| ||||||||| || || || | ||||||||||| | || Sbjct 32385 GAGCGTTCGGCCGTCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGCGG 32444 Query 35629 AACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCA 35687 | | ||||||||| |||||| |||| |||| | | || ||||||||||| | Sbjct 32445 GATACCCTCCTTGTCTTGGATCTTCGATTTCA-CGTTGTCGATGGTATCGCTCGATTCGA 32503 Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | |||| ||||| || || || || | ||| || ||||| || ||||| Sbjct 32504 CTTCCAATGTGATAGTCTTGCCAGTAAGAGTCTTGACAAAGATTTGCAT 32552 Score = 100 bits (110), Expect = 3e-16 Identities = 124/170 (73%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| | ||| || | || || |||||||| || || || Sbjct 33100 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCCTCAAGCTGCTTGCCGGCGAA 33159 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||||| ||| | | |||||||||| |||||| ||| | | | Sbjct 33160 GATCAGGCGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTTGCTCTTGACATT 33219 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCA 35714 | | |||||| ||| |||||||| | ||||| || || || |||| Sbjct 33220 GTCGATGGTGTCGGACGACTCCACCTCAAGGGTGATGGTCTTGCCGGTCA 33269 Score = 98.7 bits (108), Expect = 9e-16 Identities = 124/168 (74%), Gaps = 2/168 (1%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 |||||||| ||||||||||||| | ||| || | || || |||||||| || || || Sbjct 32818 TCCTTTTGGATGTTGTAATCGGAGAGGGTACGGCCATCCTCGAGCTGCTTGCCGGCGAAA 32877 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 ||||| ||||||||||||| ||| | || |||||| ||| |||||| ||| | ||| Sbjct 32878 ATCAAGCGCTGCTGGTCCGGAGGGATGCCCTCCTTATCCTGAATCTTTGACTTGA-CGTT 32936 Query 35666 G-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712 | | | ||| ||| || || ||||| | ||||| || || || || Sbjct 32937 GTCGATCGTATCGGATGACTCAACCTCAAGGGTGATGGTCTTGCCGGT 32984 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450790354286080