Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphoma_20sp._20B47-9_20[genbank_20GCA_5F001748405.1_202016-08-29] 576 sequences; 38,548,368 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq230 102 3e-16 seq20 89.7 2e-12 >seq230 Length=87271 Score = 102 bits (112), Expect = 3e-16 Identities = 126/171 (74%), Gaps = 1/171 (1%) Strand=Plus/Plus Query 443699 CTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTT 443758 ||||| | | || || ||||| || || | || || || | || || |||||| | | Sbjct 45322 CTTCGCCAACCGTCTGGTCGCATTCGCCGCCGTTGAGGGCATCTTCTTCAGCGGCT-CGT 45380 Query 443759 TAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACG 443818 | || ||||||||||||||||| |||||||| || |||| |||||| || || |||| Sbjct 45381 TCGCGTCCATCTTCTGGTTGAAGAAGCGTGGCCTGATGCCCGGTCTCACATTCTCAAACG 45440 Query 443819 AACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCT 443869 | |||||| ||| |||||||| |||| ||||| ||||| || |||| Sbjct 45441 AGCTGATCTCTCGCGACGAGGGCATGCACACTGACTTTGCCTGCCTCCTCT 45491 >seq20 Length=105358 Score = 89.7 bits (98), Expect = 2e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 254978 ATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAA 255037 || || ||| | ||||| | ||||||| |||||| || || |||||||| ||| ||| Sbjct 13071 ATTCCCATGCTTCGTGTCTACAACAACACGGCTCGTTATGTTGATCAAGGTGGCAACAAG 13012 Query 255038 CGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGA 255081 ||||| || || ||| |||||||||||||||| ||||| || || Sbjct 13011 CGCCCTGGCGCCTTCGCCATCTACCTGGAGCCATGGCATGCTGA 12968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588324278080320