Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphoma_20sp._20B47-9_20[genbank_20GCA_5F001748405.1_202016-08-29] 576 sequences; 38,548,368 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq289 82.4 6e-11 >seq289 Length=89211 Score = 82.4 bits (90), Expect = 6e-11 Identities = 160/232 (69%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 30228 CCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCT 30287 || |||| ||||| || ||||| | ||| ||||| || || ||||| || || || |||| Sbjct 72565 CCTTGTATTCTGCACCAAAATGTCGCCATTGGAAACCATATACCGGGCCAAGTTCACCCT 72624 Query 30288 CTTCCCTGTGCTCGAAGCCCCTCT-TGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAG 30346 |||| ||| || ||||| | ||||||| | || | |||||| |||||||| Sbjct 72625 CTTCGTAGTG-TCCTAGCCCAACGCTGTCCAAGTATTCGCGACTGCCGTTGCCGTCCCAG 72683 Query 30347 ATCTTTACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGC 30406 ||||| | || || || || ||||| || ||| || ||| ||||| ||| Sbjct 72684 ATCTTGATTCCTGCGTCGGAAAGAGCTTTGCTGTGCGTGCTGCCGGCGACAAACCAAAGC 72743 Query 30407 AGCTCCTCCACGACGGCCTTCCAA--AAGACCCTCTTGGTCGTGAGGAGGGG 30456 ||||| | | |||||| | || ||||| | || || ||||||||||| Sbjct 72744 AGCTCGCCAATGACGGC--ACGAAGGAAGACGCGTTTTGTGGTGAGGAGGGG 72793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406307547700992