Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paraphoma_20sp._20B47-9_20[genbank_20GCA_5F001748405.1_202016-08-29]
576 sequences; 38,548,368 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq254 107 4e-18
seq241 86.0 1e-11
>seq254
Length=118772
Score = 107 bits (118), Expect = 4e-18
Identities = 137/189 (72%), Gaps = 0/189 (0%)
Strand=Plus/Plus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
|||||| ||||| || |||||||| || ||||||||||| |||| | || | |||||
Sbjct 33079 GAGGACGAGATGGAGTGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATC 33138
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
|| || || ||||||||||| || | ||||||||||| | ||| || ||||| ||
Sbjct 33139 CTCAAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGAGGGATACCCTCCTTGTC 33198
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
|| || || |||||| | || | | |||| || ||| || ||||| || || ||
Sbjct 33199 CTGGATCTTGCTCTTGACATTGTCGATGGTGTCGGACGACTCCACCTCAAGGGTGATGGT 33258
Query 152072 TTTGCCCGT 152080
||||| ||
Sbjct 33259 CTTGCCGGT 33267
Score = 100 bits (110), Expect = 7e-16
Identities = 136/190 (72%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
||||| ||||| ||||| || || ||||||||||||||||||| | || | |||||
Sbjct 32797 AGGACGAGATGTAGAGTGGATTCCTTTTGGATGTTGTAATCGGAGAGGGTACGGCCATCC 32856
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || |||||||| || | | ||||||||||| | ||| || ||||| ||
Sbjct 32857 TCGAGCTGCTTGCCGGCGAAAATCAAGCGCTGCTGGTCCGGAGGGATGCCCTCCTTATCC 32916
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
||||| ||| ||||| | || | | || || ||| || ||||| || || ||
Sbjct 32917 TGAATCTTTGACTTGACGTTGTCGATCGTATCGGATGACTCAACCTCAAGGGTGATGGTC 32976
Query 152073 TTGCCCGTGA 152082
||||| ||||
Sbjct 32977 TTGCCGGTGA 32986
Score = 96.9 bits (106), Expect = 8e-15
Identities = 147/208 (71%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || ||||| ||||| || ||||||||||| || | | ||| | || ||||| |
Sbjct 32574 CAAG-TGGAGAGTGGACTCCTTCTGGATGTTGTAGTCTGAGAGAGTACGGCCGTCTTCGA 32632
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| || || || || || || | |||||| |||| | || || ||||| || ||||
Sbjct 32633 GCTGCTTGCCAGCAAAAATGAGTCGCTGCTGATCCGGGGGAATACCCTCCTTGTCCTGAA 32692
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || || || | || | |||||||| ||| || || | || ||||| ||||
Sbjct 32693 TCTTCGACTTCACGTTGTCAATCGTGTCTGAAGACTCAACCTCCAATGTGATAGTCTTGC 32752
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| ||||| ||||| ||||||| ||||||
Sbjct 32753 CAGTGAGTGTCTTGACGAAGATCTGCAT 32780
>seq241
Length=242151
Score = 86.0 bits (94), Expect = 1e-11
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | |||||| | || || || ||||| || ||||||||||| |||| | ||| |
Sbjct 46855 GAGACGGAGGACCAAGTGGAGCGTTGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCG 46796
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
|| || || || || ||||||||||| | | ||||||||||| | || || ||
Sbjct 46795 GCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGGGGAATGCCCTC 46736
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| || || || || |||||| | || | | |||| || ||| || || || ||
Sbjct 46735 CTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGACGACTCCACCTCGAGGGT 46676
Query 152066 AATAGTTTTGCCCGTGA 152082
|| || ||||| ||||
Sbjct 46675 GATCGTCTTGCCGGTGA 46659
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153812284802496
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |