Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphoma_20sp._20B47-9_20[genbank_20GCA_5F001748405.1_202016-08-29] 576 sequences; 38,548,368 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq241 141 2e-28 seq254 140 7e-28 seq275 95.1 3e-14 >seq241 Length=242151 Score = 141 bits (156), Expect = 2e-28 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || || || |||| || | ||| || || |||||||||||||| | Sbjct 46863 CCACCACGGAGACGGAGGACCAAGTGGAGCGTTGACTCCTTCTGGATGTTGTAGTCGGAC 46804 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||||||| ||||| || || || ||||| |||||||| || || ||||| ||| Sbjct 46803 AGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGGGGA 46744 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| |||||||| | || || | ||||| ||||| || | || || Sbjct 46743 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGACGACTCCACC 46684 Query 283053 TCGAGAGTGATCGTCTTACCCGT 283075 ||||| ||||||||||| || || Sbjct 46683 TCGAGGGTGATCGTCTTGCCGGT 46661 >seq254 Length=118772 Score = 140 bits (154), Expect = 7e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||||||||| || |||| || | || || || || || |||||||| Sbjct 32326 CCACCACGCAGGCGGAGCACCAAGTGCAGTGTCGACTCCTTCTGAATATTGTAGTCGCTG 32385 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 ||||| ||||| || || | || || || || ||||| | ||| || |||||| ||| Sbjct 32386 AGCGTTCGGCCGTCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGCGGG 32445 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 ||||||||||||||||||||||| | ||| ||| | ||||| || || | ||||||| Sbjct 32446 ATACCCTCCTTGTCTTGGATCTTCGATTTCACGTTGTCGATGGTATCGCTCGATTCGACT 32505 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | ||||| ||||| || || | |||||| || || || ||||| Sbjct 32506 TCCAATGTGATAGTCTTGCCAGTAAGAGTCTTGACAAAGATTTGCAT 32552 Score = 134 bits (148), Expect = 3e-26 Identities = 152/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||| ||||| || || ||||||| ||| ||| |||||||||||||| || | Sbjct 32781 ACCTCCACGAAGGCGCAGGACGAGATGTAGAGTGGATTCCTTTTGGATGTTGTAATCGGA 32840 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || ||||||||||| || || || ||||| || ||||| || || ||||| || Sbjct 32841 GAGGGTACGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAAGCGCTGCTGGTCCGGAGG 32900 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || |||||||| || || ||||||| || ||| | ||||| || || || | || || Sbjct 32901 GATGCCCTCCTTATCCTGAATCTTTGACTTGACGTTGTCGATCGTATCGGATGACTCAAC 32960 Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075 || || ||||| ||||| || || Sbjct 32961 CTCAAGGGTGATGGTCTTGCCGGT 32984 Score = 132 bits (146), Expect = 1e-25 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| || || |||| || | ||| || || |||||||||||||| | Sbjct 32553 ACCACCACGCAGACGGAGCACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCTGA 32612 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || ||||| || || || || || || ||||| || | || || || || || Sbjct 32613 GAGAGTACGGCCGTCTTCGAGCTGCTTGCCAGCAAAAATGAGTCGCTGCTGATCCGGGGG 32672 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||||||||||||| || ||||| | || ||| | || || ||||| |||| || || Sbjct 32673 AATACCCTCCTTGTCCTGAATCTTCGACTTCACGTTGTCAATCGTGTCTGAAGACTCAAC 32732 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | ||||| ||||| || || | ||||| ||||| |||||||| Sbjct 32733 CTCCAATGTGATAGTCTTGCCAGTGAGTGTCTTGACGAAGATCTGCAT 32780 Score = 131 bits (144), Expect = 4e-25 Identities = 154/206 (75%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| ||||| || || ||||| | || || || |||||||||||||| | Sbjct 33065 CCTCCACGAAGGCGGAGGACGAGATGGAGTGTAGACTCCTTCTGGATGTTGTAGTCGGAG 33124 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||| |||||||| || || || ||||| ||||||| || || ||||| || Sbjct 33125 AGGGTGCGACCATCCTCAAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGAGGG 33184 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||||| |||||| ||||| || || | ||||| ||||| || | || || Sbjct 33185 ATACCCTCCTTGTCCTGGATC-TTGCTCTTGACATTGTCGATGGTGTCGGACGACTCCAC 33243 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCA 283077 || || ||||| ||||| || |||| Sbjct 33244 CTCAAGGGTGATGGTCTTGCCGGTCA 33269 >seq275 Length=365033 Score = 95.1 bits (104), Expect = 3e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || |||||||| || || |||| || | || || || |||||||||||||| | Sbjct 273864 CCTCCACGCAGACGGAGGACCAAGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 273805 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||||||||||||| || || || ||||| ||||| | ||| || ||||| ||| Sbjct 273804 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGA 273745 Query 282993 ATACCCTCCTTGTCT 283007 || |||||||||||| Sbjct 273744 ATGCCCTCCTTGTCT 273730 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046731475064704