Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15] 14 sequences; 19,024,943 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq12 134 1e-26 >seq12 Length=4887340 Score = 134 bits (148), Expect = 1e-26 Identities = 457/705 (65%), Gaps = 18/705 (3%) Strand=Plus/Minus Query 16678 GTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCCAT 16737 ||| |||| || || || ||||| ||||| || ||||| | || || || |||||||| Sbjct 3658864 GTAGTCGCCGACACGCTTCTCGAAGAAGTTCGTCTTGCCAGCAAGCGAGATGTTCTCCAT 3658805 Query 16738 GAAATCAAAAGGATTAGTAGC-TGAAAATATTTTAGAGTACCCCAGTTCGGCGATTAAT- 16795 ||| || || || || ||| | | || || | || || || ||||| || Sbjct 3658804 GAAGTCGAATGGGTTGACAGCGTTGTAGTACTTG-GTGTTGCCAAG---GGCGAGCAACA 3658749 Query 16796 --CTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGAC 16853 | || || || ||||| || ||||||||||| | | ||||||| || | | | Sbjct 3658748 GGCGGTCAGCAACGAATTCGATGTATTGGCACATGAGCTTAGAGTTCATGCCGAGCA-AT 3658690 Query 16854 GTACC-GGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATA 16912 | || || ||||| ||||||| || |||||| || || || || | || || Sbjct 3658689 GCACAAGGGAGAGCATCCGTCAGGAACTCTTGCTCGATTGTGACTGCCTCGGTGATGATG 3658630 Query 16913 CTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAA 16972 || || | |||| | || | | || || || || | ||||| ||||| Sbjct 3658629 CTCTGGACGAGCTCCTTGCTTGGCTTGTTCTTCAGGTGAGAGAAGAGAAGACAAGCGAAG 3658570 Query 16973 TCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATC 17032 || || | ||||| || | ||| || ||||| || || || | ||| ||||| Sbjct 3658569 TCAGTGTGCATACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTGAGCCCTGGCATG 3658510 Query 17033 TTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCG 17092 || || ||||| | |||||| || || ||||| || || || ||||| ||||||||| Sbjct 3658509 AGGCCACGCTTCTTCAGCCAAAAGATTGCAGCGAAGGATCCCGAGAAGAAGATACCCTCG 3658450 Query 17093 ACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTC 17152 |||| || || ||||| | ||| |||| | || | || ||||| | |||||| Sbjct 3658449 ACGGCGGCGAAGGCGATGAGTCGGCAGGCGAAGGTGGAGTTTTTGTCGCTGATCCATCGA 3658390 Query 17153 TGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAA----TAA 17208 | |||| || || || | ||||| || | || ||||| || || || Sbjct 3658389 AGAGCCCAGTCAGCCTTCTTACGGATGCATGGAATGTTGTCGATGGCGTTGAACAGGTAG 3658330 Query 17209 TTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGA 17268 | | || | || | ||| | || || || |||||||| || ||| | || || Sbjct 3658329 GTACGCTGT----CGTGGCTCGCTGATGTATGTGTCGATGAGGAGAGAGTATGTCTCAGA 3658274 Query 17269 GTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAAC 17328 ||| ||||||||||| ||||| || ||||| |||||||| || || | || || || Sbjct 3658273 GTGGATGTTCTCCATCATAATCTGGAAGCCGTAGAAGCATCGAGCCTCTGGGATCTGGAC 3658214 Query 17329 TTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTC 17373 || | ||||||||| | || || ||||| ||||| ||||| Sbjct 3658213 CTCACCACTGAATCGTTCGACGAGGTTCTCGTTGACGATTCCGTC 3658169 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517545509429520