Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15]
14 sequences; 19,024,943 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq12 134 1e-26
>seq12
Length=4887340
Score = 134 bits (148), Expect = 1e-26
Identities = 457/705 (65%), Gaps = 18/705 (3%)
Strand=Plus/Minus
Query 16678 GTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCCAT 16737
||| |||| || || || ||||| ||||| || ||||| | || || || ||||||||
Sbjct 3658864 GTAGTCGCCGACACGCTTCTCGAAGAAGTTCGTCTTGCCAGCAAGCGAGATGTTCTCCAT 3658805
Query 16738 GAAATCAAAAGGATTAGTAGC-TGAAAATATTTTAGAGTACCCCAGTTCGGCGATTAAT- 16795
||| || || || || ||| | | || || | || || || ||||| ||
Sbjct 3658804 GAAGTCGAATGGGTTGACAGCGTTGTAGTACTTG-GTGTTGCCAAG---GGCGAGCAACA 3658749
Query 16796 --CTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGAC 16853
| || || || ||||| || ||||||||||| | | ||||||| || | | |
Sbjct 3658748 GGCGGTCAGCAACGAATTCGATGTATTGGCACATGAGCTTAGAGTTCATGCCGAGCA-AT 3658690
Query 16854 GTACC-GGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATA 16912
| || || ||||| ||||||| || |||||| || || || || | || ||
Sbjct 3658689 GCACAAGGGAGAGCATCCGTCAGGAACTCTTGCTCGATTGTGACTGCCTCGGTGATGATG 3658630
Query 16913 CTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAA 16972
|| || | |||| | || | | || || || || | ||||| |||||
Sbjct 3658629 CTCTGGACGAGCTCCTTGCTTGGCTTGTTCTTCAGGTGAGAGAAGAGAAGACAAGCGAAG 3658570
Query 16973 TCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATC 17032
|| || | ||||| || | ||| || ||||| || || || | ||| |||||
Sbjct 3658569 TCAGTGTGCATACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTGAGCCCTGGCATG 3658510
Query 17033 TTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCG 17092
|| || ||||| | |||||| || || ||||| || || || ||||| |||||||||
Sbjct 3658509 AGGCCACGCTTCTTCAGCCAAAAGATTGCAGCGAAGGATCCCGAGAAGAAGATACCCTCG 3658450
Query 17093 ACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTC 17152
|||| || || ||||| | ||| |||| | || | || ||||| | ||||||
Sbjct 3658449 ACGGCGGCGAAGGCGATGAGTCGGCAGGCGAAGGTGGAGTTTTTGTCGCTGATCCATCGA 3658390
Query 17153 TGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAA----TAA 17208
| |||| || || || | ||||| || | || ||||| || || ||
Sbjct 3658389 AGAGCCCAGTCAGCCTTCTTACGGATGCATGGAATGTTGTCGATGGCGTTGAACAGGTAG 3658330
Query 17209 TTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGA 17268
| | || | || | ||| | || || || |||||||| || ||| | || ||
Sbjct 3658329 GTACGCTGT----CGTGGCTCGCTGATGTATGTGTCGATGAGGAGAGAGTATGTCTCAGA 3658274
Query 17269 GTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAAC 17328
||| ||||||||||| ||||| || ||||| |||||||| || || | || || ||
Sbjct 3658273 GTGGATGTTCTCCATCATAATCTGGAAGCCGTAGAAGCATCGAGCCTCTGGGATCTGGAC 3658214
Query 17329 TTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTC 17373
|| | ||||||||| | || || ||||| ||||| |||||
Sbjct 3658213 CTCACCACTGAATCGTTCGACGAGGTTCTCGTTGACGATTCCGTC 3658169
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517545509429520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |