Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15] 14 sequences; 19,024,943 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq12 113 5e-20 >seq12 Length=4887340 Score = 113 bits (124), Expect = 5e-20 Identities = 286/433 (66%), Gaps = 4/433 (1%) Strand=Plus/Minus Query 16199 AGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTT 16258 ||||| |||||||| || | || || || | ||| || |||||||| || || Sbjct 3658581 AGACAAGCGAAGTCAGTGTGCATACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTG 3658522 Query 16259 AACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAG 16318 | ||||||||| || || ||||| | ||| || || ||||| || || ||||| ||| Sbjct 3658521 AGCCCTGGCATGAGGCCACGCTTCTTCAGCCAAAAGATTGCAGCGAAGGATCCCGAGAAG 3658462 Query 16319 AATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTA 16378 || |||||||| || | || || ||||| | ||| ||| | || | | ||| | Sbjct 3658461 AAGATACCCTCGACGGCGGCGAAGGCGATGAGTCGGCAGGCGAAGGTGGAGTTTTTGTCG 3658402 Query 16379 CGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCC 16438 | |||||| | |||| || || || | || || || | || ||||| Sbjct 3658401 CTGATCCATCGAAGAGCCCAGTCAGCCTTCTTACGGATGCATGGAATGTTGTCGATGGCG 3658342 Query 16439 TTAAACAATTTCT--CTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGT 16496 || |||| | | | || || | || | || || || || || || | | || Sbjct 3658341 TTGAACAGGTAGGTACGCTGTCGTGGCT--CGCTGATGTATGTGTCGATGAGGAGAGAGT 3658284 Query 16497 ACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCG 16556 | | || ||||| |||||||| || ||||| || || ||||||||||||||||| | Sbjct 3658283 ATGTCTCAGAGTGGATGTTCTCCATCATAATCTGGAAGCCGTAGAAGCATCGAGCCTCTG 3658224 Query 16557 CTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTG 16616 || || || || | |||||||| | |||||||| || ||||| |||||| || Sbjct 3658223 GGATCTGGACCTCACCACTGAATCGTTCGACGAGGTTCTCGTTGACGATTCCGTCAGATG 3658164 Query 16617 CAGCAAAAAACGC 16629 ||||||| || || Sbjct 3658163 CAGCAAAGAATGC 3658151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511414310502480