Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15] 14 sequences; 19,024,943 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq11 179 4e-40 seq12 95.1 1e-14 >seq11 Length=3629084 Score = 179 bits (198), Expect = 4e-40 Identities = 480/726 (66%), Gaps = 12/726 (2%) Strand=Plus/Minus Query 53951 TCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 54010 |||||||| ||||| | |||| | | || || || |||| |||||||| | | | Sbjct 2143030 TCAAACTCCTCTCCATAGACATCTGCAAGGCCGGGGCACTCATTTGGACACATGAGAGTC 2142971 Query 54011 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 54070 ||||| |||| || || || ||||| |||||||| || ||||| || || || Sbjct 2142970 CACTCGCCGTTGGACTCGACACGCTTCATGAAGAGATCTGGTATCCAGAGGGCGTAGAAG 2142911 Query 54071 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 54130 ||||| | | | | || || || || |||||| || |||||||| || | Sbjct 2142910 AGATCGCGAGCGCGAACCTCTTCCTTGCCGTGATTCTTGCGGAGGTCGAGGAAGGCAAAC 2142851 Query 54131 ATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCC 54190 | ||| | ||||| || |||||||| |||| | | || || |||||||| || ||| Sbjct 2142850 ACATCGGCGTGCCATGGCTCCAAGTAGATGGCGAATGCACCTGGTCGTTTGTTGCCGCCC 2142791 Query 54191 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 54250 || || | ||||| |||||||| || | |||| || ||| || | | ||| ||||| Sbjct 2142790 TGGTCAACGTATCGGGCGGTGTTGTTGAACACTCGCAGCATAGGGACGAGACCGTTGGAC 2142731 Query 54251 GCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT---AT-TACTAATTGATAG 54306 | || ||||| || ||| || ||||| |||||||| || | | |||| | Sbjct 2142730 GTGCCGTTGGTGCCACTGATGTATGAACCACTAGCACGAATGCGATGTGCG--TTGA--G 2142675 Query 54307 ACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCC 54366 ||| | || || || |||| ||||| | ||||| || | ||| || |||||||| Sbjct 2142674 ACCGACGCCACCAGCATTTTTTGAGATCATAGCGCAAGTCTTGAGCGTGTCGTAGATGCC 2142615 Query 54367 CTCTATACTATCATCCATCATGTTAAGTAGAAAACA-GCT-AGACATTTGGTGACGACTA 54424 ||| || || || ||| |||||| | || || || | | || | || | | Sbjct 2142614 CTCAATGCTGTCCTCCTTCATGTCGACAAGGAAGCATGATGCGAGCTGTGCT--TGTGGT 2142557 Query 54425 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTG 54484 || || || ||| | || || || ||||| || || | || | || | || ||| Sbjct 2142556 GTGCCAGCGGCAAAGAGCGTTGGCGAGGCGTGTGTGAAGTACTTGTTGGACATGAGGTTG 2142497 Query 54485 TACGTCTCGATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAAC 54544 || || ||||| || | || || ||| | ||| || || || || |||||||| | | Sbjct 2142496 TAAGTTTCGATGGCAGCCTCAATGTCCTCTCCATGTATACCGACAGCCACACGCATAATC 2142437 Query 54545 ATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAA 54604 |||||||| |||| ||| | |||||| | | || || | ||| ||| |||| | Sbjct 2142436 ATGTGCTGTGGTCGTTCTGCAATCTTGCCGCTGATGCGCAAGAGGTATGATCGCTCCAGA 2142377 Query 54605 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGT 54664 || || |||||||| || | ||| |||||||| ||||| | || | ||||| || Sbjct 2142376 GTCTTGAAACCAAAGTACTGGTAGTTGAAGTCTCGGTCGTACACGATGGCAGAGTTCAGC 2142317 Query 54665 TTATCC 54670 | |||| Sbjct 2142316 TCATCC 2142311 >seq12 Length=4887340 Score = 95.1 bits (104), Expect = 1e-14 Identities = 359/560 (64%), Gaps = 10/560 (2%) Strand=Plus/Minus Query 24134 ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAG 24193 ||| ||||| || ||| | |||||| || | | || | |||||||| || ||||| Sbjct 3658579 ACAAGCGAAGTCAGTGTGCATACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTGAG 3658520 Query 24194 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAA 24253 || ||||| ||||||||||| || |||||||| || | || || ||||| || ||||| Sbjct 3658519 CCCTGGCATGAGGCCACGCTTCTTCAGCCAAAAGATTGCAGCGAAGGATCCCGAGAAGAA 3658460 Query 24254 AATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCG---CTGTCATG 24310 || || || || || || ||||| || |||| | | || | |||| Sbjct 3658459 GATACCCTCGACGGCGGCGAAGGCGATGAGTCGGCAGGCGAAGGTGGAGTTTTTGTCGCT 3658400 Query 24311 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATT 24370 ||||| ||||||| || |||||||| | || || || | || || || || Sbjct 3658399 GATCCATCGAAGAGCCCAGTCAGCCTTCTTACGGATGCATGGAATGTTGTCGATGGCGTT 3658340 Query 24371 AAAGAGATAGtt--tttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATAC 24428 || || ||| | | || | | || | | ||||| || || | ||| || Sbjct 3658339 GAACAGGTAGGTACGCTGTCGTGGC--TCGCTGATGTATGTGTCGATGAGGAGAGAGTAT 3658282 Query 24429 ATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTA 24488 | || || || ||||| || || || || || |||||||| |||| |||||| | Sbjct 3658281 GTCTCAGAGTGGATGTTCTCCATCATAATCTGGAAGCCGTAGAAGCATCGAGCCTCTGGG 3658222 Query 24489 ATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCT 24548 ||||| || || || |||||||| | | || || || || ||||||||| || Sbjct 3658221 ATCTGGACCTCACCACTGAATCGTTCGACGAGGTTCTCGTTGACGATTCCGTCAGATGCA 3658162 Query 24549 GCAAAAAACGCCAATACATGTTTTATAAAATA---TTTTTCGTCTGGTGTTAGTTTATTC 24605 ||||| || || | || || | || | | ||||| | | || ||| Sbjct 3658161 GCAAAGAATGCAAGCACGTGAGAGACGAAGAAGCGCTCATCGTCGTTCAATCGCTTGTTC 3658102 Query 24606 CAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCC 24665 || || | | || || || | || | ||| || | ||||| ||||| ||||| ||| Sbjct 3658101 CAGTCGTGAAGGTCCTTTGACAGGTCAATTTCCTCAGCCGTCCAGAATGACGCCTCGGCC 3658042 Query 24666 TTTTTATACATATTCCAGAT 24685 || || ||||| | |||||| Sbjct 3658041 TTCTTGTACATCTGCCAGAT 3658022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593721496098720