Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15] 14 sequences; 19,024,943 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq13 122 7e-23 seq6 87.8 2e-12 >seq13 Length=2085791 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || |||||||| | || || | ||||| |||||||||||| |||||||| ||||| | | Sbjct 973626 CCACCTCGCAGACGAAGAACGAGATGCAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAC 973567 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || | ||||| ||||| || || || | || | || ||||||||| || Sbjct 973566 AGAGTACGGCCATCCTCAAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCTGGTGGA 973507 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| ||||| || || | | ||| ||| ||| || ||| Sbjct 973506 ATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATAGTGTCAGAGGACTCAACC 973447 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| ||||||||||| || | || |||||||| |||||||| Sbjct 973446 TCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACAAAGATTTGCAT 973400 Score = 91.5 bits (100), Expect = 1e-13 Identities = 124/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || |||||||| |||||||| || |||| ||||| || | ||||| ||||| ||||| Sbjct 973368 GTAGACTCCTTCTGAATGTTGTAATCCGAGAGGGTGCGGCCATCCTCAAGCTGCTTGCCT 973309 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| | || | | ||||||||| || | |||||||||||| ||||||| || Sbjct 973308 GCAAAGATCAAGCGCTGCTGGTCAGGTGGAATGCCTTCCTTGTCCTGGATCTTTGACTTG 973249 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGT 21151 || | | ||| ||||| || ||| || | ||| ||||||||||| || Sbjct 973248 ACGTTGTCGATGGTATCTGAGGACTCGACCTCAAGGGTGATGGTCTTGCCAGT 973196 >seq6 Length=1630888 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || ||||| || |||||||| | ||| | || |||||||| || ||||| ||||| | Sbjct 190443 CCACCTCGAAGTCTGAGCACAAGATGAAGTGTCGACTCCTTCTGGATGTTGTAGTCTGAG 190502 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || | ||||| ||||| || || ||| | ||||| | |||||||| || Sbjct 190503 AGCGTGCGGCCATCCTCGAGCTGCTTTCCGGCAAAGATAAGACGTTGCTGGTCTGGTGGA 190562 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| || || || ||||| ||||| | | ||| |||||| || ||| Sbjct 190563 ATGCCCTCTTTATCCTGAATCTTGCTCTTCACATTGTCGATAGTATCGGAGGACTCAACC 190622 Query 21129 TCCACGGTAATGGTCTTGCCGGT 21151 || | ||| ||||||||||| || Sbjct 190623 TCGAGGGTGATGGTCTTGCCCGT 190645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422259127952024