Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15]
14 sequences; 19,024,943 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq12 369 4e-97
seq13 123 3e-23
seq6 123 3e-23
>seq12
Length=4887340
Score = 369 bits (408), Expect = 4e-97
Identities = 571/806 (71%), Gaps = 12/806 (1%)
Strand=Plus/Plus
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695
|| |||| |||||||| |||||||||||||| |||||||| | ||||| | ||||||
Sbjct 3658022 ATCTGGCAGATGTACAAGAAGGCCGAGGCGTCATTCTGGACGGCTGAGGAAATTGACCTG 3658081
Query 116696 TCCAAGGACACGAGCGACTGGGA---GCGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752
|| |||||| ||||||| | ||| ||||||||| | |||||| ||| ||
Sbjct 3658082 TCAAAGGACCTTCACGACTGGAACAAGCGATTGAACGACGATGAGCGCTTCTTCGTCTCT 3658141
Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812
|||||||| || || || || || ||||| |||||||||||||| || ||||| ||
Sbjct 3658142 CACGTGCTTGCATTCTTTGCTGCATCTGACGGAATCGTCAACGAGAACCTCGTCGAACGA 3658201
Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872
||| | ||||| ||| | | ||||| || |||||||||||||| ||||| |||
Sbjct 3658202 TTCAGTGGTGAGGTCCAGATCCCAGAGGCTCGATGCTTCTACGGCTTCCAGATTATGATG 3658261
Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT--GCGCTCTTCGG 116930
|||||| | ||||| || | || || |||||||||||| ||| | ||| | ||
Sbjct 3658262 GAGAACATCCACTCTGAGACATACTCTCTCCTCATCGACACATACATCAGCGAGCCACGA 3658321
Query 116931 AGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCG 116990
| | | || | | ||| ||||||||||| | || || ||| || ||||||| |
Sbjct 3658322 CAGCGTACCTACCT--GTTCAACGCCATCGACAACATTCCATGCATCCGTAAGAAGGCTG 3658379
Query 116991 AGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCT 117050
| ||||| || || |||||| || || | | || |||||| | || || | ||||
Sbjct 3658380 ACTGGGCTCTTCGATGGATCAGCGACAAAAACTCCACCTTCGCCTGCCGACTCATCGCCT 3658439
Query 117051 TCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGA 117110
|||| ||||||||||| ||||||| ||||| ||||| || || |||||||| ||||
Sbjct 3658440 TCGCCGCCGTCGAGGGTATCTTCTTCTCGGGATCCTTCGCTGCAATCTTTTGGCTGAAGA 3658499
Query 117111 AACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTC 117170
| || ||||||||||| || || || ||| ||||||||||||||| | || ||||||
Sbjct 3658500 AGCGTGGCCTCATGCCAGGGCTCACCTTCTCCAACGAGCTCATCTCTCGTGATGAGGGTA 3658559
Query 117171 TGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGCGC 117230
|||| ||||| || ||| | || ||| || || | | || ||| || ||
Sbjct 3658560 TGCACACTGACTTCGCTTGTCTTCTCTTCTCTCACCTGAAGAACAAGCCAAGCAAGGAGC 3658619
Query 117231 GCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGC 117290
|||| | ||| ||||||| || ||| | |||||||| ||||| || || || |
Sbjct 3658620 TCGTCCAGAGCATCATCACCGAGGCAGTCACAATCGAGCAAGAGTTCCTGACGGATGCTC 3658679
Query 117291 TGCC-GGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCGAGTTCGT 117348
| || |||| | |||| || | || | | || | |||| ||||||||||| |||||
Sbjct 3658680 TCCCTTGTGCAT-TGCTCGGCATGAACT-CTAAGCTCATGTGCCAATACATCGAATTCGT 3658737
Query 117349 CGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACCCGCT 117408
|| ||| | ||| |||||| || | | | ||||| |||||||| | |||||| |
Sbjct 3658738 TGCTGACCGCCTGTTGCTCGCCCTTGGCAACACCAAGTACTACAACGCTGTCAACCCATT 3658797
Query 117409 GGACTTTATGAACCTCATCTC-CTTG 117433
||||| ||| | |||||| ||||
Sbjct 3658798 CGACTTCATGGAGAACATCTCGCTTG 3658823
Score = 113 bits (124), Expect = 5e-20
Identities = 137/187 (73%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAGG 40771
||||||| || || |||||| |||| || || | | |||| | | | |||||
Sbjct 1403786 TCACGGGTAAGACTATCACCCTCGAGGTGGAGTCTTCAGACACAATCGACAATGTCAAGT 1403727
Query 40772 AAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCA 40831
||| |||| ||||| |||||||| || | |||||||| || || |||| ||| || |
Sbjct 1403726 CAAAGATTCAAGACAAGGAGGGCATACCACCAGACCAGCAGCGTCTGATCTTCGCCGGAA 1403667
Query 40832 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGC 40891
| ||||| || |||| ||||| || |||||||||||||||||||||| |||| || |
Sbjct 1403666 AGCAGCTTGAGGACGGTCGCACTCTTTCCGACTACAACATCCAGAAGGAGTCCACCCTTC 1403607
Query 40892 ATCTAGT 40898
| || ||
Sbjct 1403606 ACCTGGT 1403600
>seq13
Length=2085791
Score = 123 bits (136), Expect = 3e-23
Identities = 155/210 (74%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| || || || || || || ||||| ||||||||| | || || || || |
Sbjct 973400 ATGCAAATCTTTGTCAAGACTCTGACTGGCAAGACCATCACCCTTGAGGTTGAGTCCTCT 973459
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | |||| ||||| || |||| ||||| |||||||| || | |||||
Sbjct 973460 GACACTATCGACAACG-TCAAGTCGAAGATTCAGGACAAGGAGGGCATTCCACCAGACCA 973518
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| ||| | |||| ||| || || ||||| || || | || || || |||||||||
Sbjct 973519 GCAGCGATTGATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGTACTCTGTCCGACTACAA 973578
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
||| ||||||||| |||| |||||||| ||
Sbjct 973579 CATTCAGAAGGAGTCCACTCTGCATCTCGT 973608
Score = 87.8 bits (96), Expect = 2e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| || || ||||| ||||| || || || | || ||||| | |
Sbjct 973628 ATGCAAATCTTCGTCAAGACTCTCACTGGCAAGACTATTACATTAGAAGTCGAGTCATCG 973687
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | ||| || |||| ||||| ||||| || || | || |||
Sbjct 973688 GACACAATCGACAATGTGAAGAGCAAGATTCAAGACAAGGAGGGTATTCCACCAGATCAG 973747
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || ||||||| ||| || || ||||| || |||| || || | |||||||||
Sbjct 973748 CAGCGTCTCATCTTCGCTGGAAAGCAGCTCGAGGACGGCCGTACGTTGTCTGACTACAAC 973807
Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892
|| ||||||||| ||| ||||
Sbjct 973808 ATTCAGAAGGAGAGCACCTTGCA 973830
>seq6
Length=1630888
Score = 123 bits (136), Expect = 3e-23
Identities = 148/201 (74%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758
||||| || || ||||||||||| ||||||||| |||| || || || |||| | |
Sbjct 190660 TTCGTGAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTTGAGTCCTCCGATACTATC 190601
Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818
| | | ||| || |||| || ||||||||||| || | ||||||||||| ||
Sbjct 190600 GACAATGTGAAGAGCAAGATTCAGGATAAAGAGGGCATTCCACCAGACCAGCAACGTCTT 190541
Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878
|||| || || || ||||| || || | ||||| ||| ||||||||||||||||||
Sbjct 190540 ATCTTTGCCGGAAAGCAGCTCGAGGATGGCCGCACGCTCTCAGACTACAACATCCAGAAG 190481
Query 40879 GAGGCCACGCTGCATCTAGTG 40899
||| | || || ||||| |||
Sbjct 190480 GAGTCGACACTTCATCTTGTG 190460
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515219109836640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |