Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15] 14 sequences; 19,024,943 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq12 369 4e-97 seq13 123 3e-23 seq6 123 3e-23 >seq12 Length=4887340 Score = 369 bits (408), Expect = 4e-97 Identities = 571/806 (71%), Gaps = 12/806 (1%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| |||||||||||||| |||||||| | ||||| | |||||| Sbjct 3658022 ATCTGGCAGATGTACAAGAAGGCCGAGGCGTCATTCTGGACGGCTGAGGAAATTGACCTG 3658081 Query 116696 TCCAAGGACACGAGCGACTGGGA---GCGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 || |||||| ||||||| | ||| ||||||||| | |||||| ||| || Sbjct 3658082 TCAAAGGACCTTCACGACTGGAACAAGCGATTGAACGACGATGAGCGCTTCTTCGTCTCT 3658141 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 |||||||| || || || || || ||||| |||||||||||||| || ||||| || Sbjct 3658142 CACGTGCTTGCATTCTTTGCTGCATCTGACGGAATCGTCAACGAGAACCTCGTCGAACGA 3658201 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| | ||||| ||| | | ||||| || |||||||||||||| ||||| ||| Sbjct 3658202 TTCAGTGGTGAGGTCCAGATCCCAGAGGCTCGATGCTTCTACGGCTTCCAGATTATGATG 3658261 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT--GCGCTCTTCGG 116930 |||||| | ||||| || | || || |||||||||||| ||| | ||| | || Sbjct 3658262 GAGAACATCCACTCTGAGACATACTCTCTCCTCATCGACACATACATCAGCGAGCCACGA 3658321 Query 116931 AGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCG 116990 | | | || | | ||| ||||||||||| | || || ||| || ||||||| | Sbjct 3658322 CAGCGTACCTACCT--GTTCAACGCCATCGACAACATTCCATGCATCCGTAAGAAGGCTG 3658379 Query 116991 AGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCT 117050 | ||||| || || |||||| || || | | || |||||| | || || | |||| Sbjct 3658380 ACTGGGCTCTTCGATGGATCAGCGACAAAAACTCCACCTTCGCCTGCCGACTCATCGCCT 3658439 Query 117051 TCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGA 117110 |||| ||||||||||| ||||||| ||||| ||||| || || |||||||| |||| Sbjct 3658440 TCGCCGCCGTCGAGGGTATCTTCTTCTCGGGATCCTTCGCTGCAATCTTTTGGCTGAAGA 3658499 Query 117111 AACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTC 117170 | || ||||||||||| || || || ||| ||||||||||||||| | || |||||| Sbjct 3658500 AGCGTGGCCTCATGCCAGGGCTCACCTTCTCCAACGAGCTCATCTCTCGTGATGAGGGTA 3658559 Query 117171 TGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGCGC 117230 |||| ||||| || ||| | || ||| || || | | || ||| || || Sbjct 3658560 TGCACACTGACTTCGCTTGTCTTCTCTTCTCTCACCTGAAGAACAAGCCAAGCAAGGAGC 3658619 Query 117231 GCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGC 117290 |||| | ||| ||||||| || ||| | |||||||| ||||| || || || | Sbjct 3658620 TCGTCCAGAGCATCATCACCGAGGCAGTCACAATCGAGCAAGAGTTCCTGACGGATGCTC 3658679 Query 117291 TGCC-GGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCGAGTTCGT 117348 | || |||| | |||| || | || | | || | |||| ||||||||||| ||||| Sbjct 3658680 TCCCTTGTGCAT-TGCTCGGCATGAACT-CTAAGCTCATGTGCCAATACATCGAATTCGT 3658737 Query 117349 CGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACCCGCT 117408 || ||| | ||| |||||| || | | | ||||| |||||||| | |||||| | Sbjct 3658738 TGCTGACCGCCTGTTGCTCGCCCTTGGCAACACCAAGTACTACAACGCTGTCAACCCATT 3658797 Query 117409 GGACTTTATGAACCTCATCTC-CTTG 117433 ||||| ||| | |||||| |||| Sbjct 3658798 CGACTTCATGGAGAACATCTCGCTTG 3658823 Score = 113 bits (124), Expect = 5e-20 Identities = 137/187 (73%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAGG 40771 ||||||| || || |||||| |||| || || | | |||| | | | ||||| Sbjct 1403786 TCACGGGTAAGACTATCACCCTCGAGGTGGAGTCTTCAGACACAATCGACAATGTCAAGT 1403727 Query 40772 AAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCA 40831 ||| |||| ||||| |||||||| || | |||||||| || || |||| ||| || | Sbjct 1403726 CAAAGATTCAAGACAAGGAGGGCATACCACCAGACCAGCAGCGTCTGATCTTCGCCGGAA 1403667 Query 40832 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGC 40891 | ||||| || |||| ||||| || |||||||||||||||||||||| |||| || | Sbjct 1403666 AGCAGCTTGAGGACGGTCGCACTCTTTCCGACTACAACATCCAGAAGGAGTCCACCCTTC 1403607 Query 40892 ATCTAGT 40898 | || || Sbjct 1403606 ACCTGGT 1403600 >seq13 Length=2085791 Score = 123 bits (136), Expect = 3e-23 Identities = 155/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || || || || ||||| ||||||||| | || || || || | Sbjct 973400 ATGCAAATCTTTGTCAAGACTCTGACTGGCAAGACCATCACCCTTGAGGTTGAGTCCTCT 973459 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| ||||| || |||| ||||| |||||||| || | ||||| Sbjct 973460 GACACTATCGACAACG-TCAAGTCGAAGATTCAGGACAAGGAGGGCATTCCACCAGACCA 973518 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| ||| | |||| ||| || || ||||| || || | || || || ||||||||| Sbjct 973519 GCAGCGATTGATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGTACTCTGTCCGACTACAA 973578 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||| ||||||||| |||| |||||||| || Sbjct 973579 CATTCAGAAGGAGTCCACTCTGCATCTCGT 973608 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || ||||| ||||| || || || | || ||||| | | Sbjct 973628 ATGCAAATCTTCGTCAAGACTCTCACTGGCAAGACTATTACATTAGAAGTCGAGTCATCG 973687 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||| || |||| ||||| ||||| || || | || ||| Sbjct 973688 GACACAATCGACAATGTGAAGAGCAAGATTCAAGACAAGGAGGGTATTCCACCAGATCAG 973747 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || ||||||| ||| || || ||||| || |||| || || | ||||||||| Sbjct 973748 CAGCGTCTCATCTTCGCTGGAAAGCAGCTCGAGGACGGCCGTACGTTGTCTGACTACAAC 973807 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 || ||||||||| ||| |||| Sbjct 973808 ATTCAGAAGGAGAGCACCTTGCA 973830 >seq6 Length=1630888 Score = 123 bits (136), Expect = 3e-23 Identities = 148/201 (74%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || ||||||||||| ||||||||| |||| || || || |||| | | Sbjct 190660 TTCGTGAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTTGAGTCCTCCGATACTATC 190601 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | | | ||| || |||| || ||||||||||| || | ||||||||||| || Sbjct 190600 GACAATGTGAAGAGCAAGATTCAGGATAAAGAGGGCATTCCACCAGACCAGCAACGTCTT 190541 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 |||| || || || ||||| || || | ||||| ||| |||||||||||||||||| Sbjct 190540 ATCTTTGCCGGAAAGCAGCTCGAGGATGGCCGCACGCTCTCAGACTACAACATCCAGAAG 190481 Query 40879 GAGGCCACGCTGCATCTAGTG 40899 ||| | || || ||||| ||| Sbjct 190480 GAGTCGACACTTCATCTTGTG 190460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515219109836640