Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15]
14 sequences; 19,024,943 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq12 113 6e-20
>seq12
Length=4887340
Score = 113 bits (124), Expect = 6e-20
Identities = 363/560 (65%), Gaps = 10/560 (2%)
Strand=Plus/Minus
Query 33581 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAG 33640
||| ||||| || ||||| |||||| || | | || | ||||| || || |||||
Sbjct 3658579 ACAAGCGAAGTCAGTGTGCATACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTGAG 3658520
Query 33641 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAA 33700
|| ||||| ||||||||||| || |||||||| || | |||||| ||||| || |||||
Sbjct 3658519 CCCTGGCATGAGGCCACGCTTCTTCAGCCAAAAGATTGCAGCGAAGGATCCCGAGAAGAA 3658460
Query 33701 GATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG---CTGTCATG 33757
||| || || || || || ||||| || |||| | | || | ||||
Sbjct 3658459 GATACCCTCGACGGCGGCGAAGGCGATGAGTCGGCAGGCGAAGGTGGAGTTTTTGTCGCT 3658400
Query 33758 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 33817
||||| ||||||| || |||||||| | || || || | || ||||| ||
Sbjct 3658399 GATCCATCGAAGAGCCCAGTCAGCCTTCTTACGGATGCATGGAATGTTGTCGATGGCGTT 3658340
Query 33818 AAAGAGATAGtt--tttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATAC 33875
|| || ||| | | || | | || | | || || ||||| | ||| ||
Sbjct 3658339 GAACAGGTAGGTACGCTGTCGTGGC--TCGCTGATGTATGTGTCGATGAGGAGAGAGTAT 3658282
Query 33876 ATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTA 33935
| || || || ||||| || || ||||| || |||||||| |||| |||||| |
Sbjct 3658281 GTCTCAGAGTGGATGTTCTCCATCATAATCTGGAAGCCGTAGAAGCATCGAGCCTCTGGG 3658222
Query 33936 ATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCT 33995
||||| || || || |||||||| | | || || || || ||||| ||| ||
Sbjct 3658221 ATCTGGACCTCACCACTGAATCGTTCGACGAGGTTCTCGTTGACGATTCCGTCAGATGCA 3658162
Query 33996 GCAAAAAACGCCAATACATGTTTTATAAAATA---TTTTTCGTCTGGTGTTAGTTTATTC 34052
||||| || || | || || | || | | ||||| | | || |||
Sbjct 3658161 GCAAAGAATGCAAGCACGTGAGAGACGAAGAAGCGCTCATCGTCGTTCAATCGCTTGTTC 3658102
Query 34053 CAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCC 34112
|| || | | || || || | || | ||| || | ||||| ||||| ||||| |||
Sbjct 3658101 CAGTCGTGAAGGTCCTTTGACAGGTCAATTTCCTCAGCCGTCCAGAATGACGCCTCGGCC 3658042
Query 34113 TTTTTATACATATTCCAGAT 34132
|| || ||||| | ||||||
Sbjct 3658041 TTCTTGTACATCTGCCAGAT 3658022
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629817489781920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |