Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15]
14 sequences; 19,024,943 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq11 176 6e-39
seq12 95.1 2e-14
>seq11
Length=3629084
Score = 176 bits (194), Expect = 6e-39
Identities = 479/726 (66%), Gaps = 12/726 (2%)
Strand=Plus/Minus
Query 65982 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 66041
|| ||||| ||||| | |||| | | || || || |||| |||||||| | | |
Sbjct 2143030 TCAAACTCCTCTCCATAGACATCTGCAAGGCCGGGGCACTCATTTGGACACATGAGAGTC 2142971
Query 66042 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 66101
||||| |||| || || || ||||| |||||||| || ||||| || || ||
Sbjct 2142970 CACTCGCCGTTGGACTCGACACGCTTCATGAAGAGATCTGGTATCCAGAGGGCGTAGAAG 2142911
Query 66102 AAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 66161
| ||| | | | | || || || || |||||| || |||||||| || |
Sbjct 2142910 AGATCGCGAGCGCGAACCTCTTCCTTGCCGTGATTCTTGCGGAGGTCGAGGAAGGCAAAC 2142851
Query 66162 ATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 66221
| ||| ||||| || |||||||| ||||| | | || || |||||||| || |||
Sbjct 2142850 ACATCGGCGTGCCATGGCTCCAAGTAGATGGCGAATGCACCTGGTCGTTTGTTGCCGCCC 2142791
Query 66222 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 66281
|| || | ||||| |||||||| || | |||| || ||| || | | ||| |||||
Sbjct 2142790 TGGTCAACGTATCGGGCGGTGTTGTTGAACACTCGCAGCATAGGGACGAGACCGTTGGAC 2142731
Query 66282 GTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAAT---AT-TACTAATTGATAG 66337
|| || ||||| || ||| || ||||| |||||||| || | | |||| |
Sbjct 2142730 GTGCCGTTGGTGCCACTGATGTATGAACCACTAGCACGAATGCGATGTGCG--TTGA--G 2142675
Query 66338 ACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCC 66397
||| | || || || |||| ||||| | ||||| || | ||| || ||||||||
Sbjct 2142674 ACCGACGCCACCAGCATTTTTTGAGATCATAGCGCAAGTCTTGAGCGTGTCGTAGATGCC 2142615
Query 66398 CTCTATACTATCATCCATCATGTTAAGTAGAAAACA-GCT-AGACATTTGGTGACGACTA 66455
||| || || || ||| |||||| | || || || | | || | || | |
Sbjct 2142614 CTCAATGCTGTCCTCCTTCATGTCGACAAGGAAGCATGATGCGAGCTGTGCT--TGTGGT 2142557
Query 66456 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTG 66515
|| || || ||| | || || || ||||| || || | || | || | || |||
Sbjct 2142556 GTGCCAGCGGCAAAGAGCGTTGGCGAGGCGTGTGTGAAGTACTTGTTGGACATGAGGTTG 2142497
Query 66516 TACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAAC 66575
|| || || || || | || || ||| | ||| || || || || |||||||| | |
Sbjct 2142496 TAAGTTTCGATGGCAGCCTCAATGTCCTCTCCATGTATACCGACAGCCACACGCATAATC 2142437
Query 66576 ATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAA 66635
|||||||| |||| ||| | |||||| | | || ||| | ||| ||| |||| |
Sbjct 2142436 ATGTGCTGTGGTCGTTCTGCAATCTTGCCGCTGATGCGCAAGAGGTATGATCGCTCCAGA 2142377
Query 66636 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGT 66695
|| || |||||||| || | ||| |||||||| ||||| | || | ||||| ||
Sbjct 2142376 GTCTTGAAACCAAAGTACTGGTAGTTGAAGTCTCGGTCGTACACGATGGCAGAGTTCAGC 2142317
Query 66696 TTATCC 66701
| ||||
Sbjct 2142316 TCATCC 2142311
>seq12
Length=4887340
Score = 95.1 bits (104), Expect = 2e-14
Identities = 112/152 (74%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 36157 ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAG 36216
||| ||||| || ||| | |||||| || | | || | |||||||| || |||||
Sbjct 3658579 ACAAGCGAAGTCAGTGTGCATACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTGAG 3658520
Query 36217 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAA 36276
|| ||||| ||||||||||| || |||||||| || | || || ||||| || |||||
Sbjct 3658519 CCCTGGCATGAGGCCACGCTTCTTCAGCCAAAAGATTGCAGCGAAGGATCCCGAGAAGAA 3658460
Query 36277 AATTCCTTCTACTGCCGCAAAGGCAATAAGTC 36308
|| || || || || || ||||| || ||||
Sbjct 3658459 GATACCCTCGACGGCGGCGAAGGCGATGAGTC 3658428
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658172684819760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |