Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15] 14 sequences; 19,024,943 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq11 188 1e-42 seq12 118 2e-21 >seq11 Length=3629084 Score = 188 bits (208), Expect = 1e-42 Identities = 482/726 (66%), Gaps = 12/726 (2%) Strand=Plus/Minus Query 79861 TCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGAC 79920 || ||||| ||||| | ||||| | | || || || || | |||||||| | | | Sbjct 2143030 TCAAACTCCTCTCCATAGACATCTGCAAGGCCGGGGCACTCATTTGGACACATGAGAGTC 2142971 Query 79921 CACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 79980 ||||| || | || || || ||||| |||||||| || ||||| || || || Sbjct 2142970 CACTCGCCGTTGGACTCGACACGCTTCATGAAGAGATCTGGTATCCAGAGGGCGTAGAAG 2142911 Query 79981 AGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 80040 ||||| | | | | ||| || || || |||||| || |||||||| || | Sbjct 2142910 AGATCGCGAGCGCGAACCTCTTCCTTGCCGTGATTCTTGCGGAGGTCGAGGAAGGCAAAC 2142851 Query 80041 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCC 80100 | ||| | ||||| || |||||||| ||||| | | || ||||||||||| || ||| Sbjct 2142850 ACATCGGCGTGCCATGGCTCCAAGTAGATGGCGAATGCACCTGGTCGTTTGTTGCCGCCC 2142791 Query 80101 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 80160 || || | ||||| |||||||| || | |||| || ||| || | | ||| ||||| Sbjct 2142790 TGGTCAACGTATCGGGCGGTGTTGTTGAACACTCGCAGCATAGGGACGAGACCGTTGGAC 2142731 Query 80161 GTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT---AT-TACTAATTGATAG 80216 || || ||||| || ||| || ||||| |||||||| || | | ||| || Sbjct 2142730 GTGCCGTTGGTGCCACTGATGTATGAACCACTAGCACGAATGCGATGTGC--GTTG--AG 2142675 Query 80217 ACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCC 80276 ||| | || || || |||| ||||| | ||||| || | ||| || |||||||| Sbjct 2142674 ACCGACGCCACCAGCATTTTTTGAGATCATAGCGCAAGTCTTGAGCGTGTCGTAGATGCC 2142615 Query 80277 CTCTATGCTATCATCAATCATGTTAAGTAGAAAACA-GCT-AGACATTTGGTGACGACTA 80334 ||| ||||| || || |||||| | || || || | | || | || | | Sbjct 2142614 CTCAATGCTGTCCTCCTTCATGTCGACAAGGAAGCATGATGCGAGCTGTGCT--TGTGGT 2142557 Query 80335 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTG 80394 || || || ||| | || || || ||||| || || | || | |||| || ||| Sbjct 2142556 GTGCCAGCGGCAAAGAGCGTTGGCGAGGCGTGTGTGAAGTACTTGTTGGACATGAGGTTG 2142497 Query 80395 TACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAAC 80454 || || || || || | || || ||| | ||| || || || || |||||||| | | Sbjct 2142496 TAAGTTTCGATGGCAGCCTCAATGTCCTCTCCATGTATACCGACAGCCACACGCATAATC 2142437 Query 80455 ATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAA 80514 |||||||| |||| ||| | |||||| | || ||| | ||| ||| |||| | Sbjct 2142436 ATGTGCTGTGGTCGTTCTGCAATCTTGCCGCTGATGCGCAAGAGGTATGATCGCTCCAGA 2142377 Query 80515 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGT 80574 || || |||||||| || | ||| |||||||| ||||| | || | ||||| || Sbjct 2142376 GTCTTGAAACCAAAGTACTGGTAGTTGAAGTCTCGGTCGTACACGATGGCAGAGTTCAGC 2142317 Query 80575 TTATCC 80580 | |||| Sbjct 2142316 TCATCC 2142311 >seq12 Length=4887340 Score = 118 bits (130), Expect = 2e-21 Identities = 364/560 (65%), Gaps = 10/560 (2%) Strand=Plus/Minus Query 49959 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAG 50018 ||| ||||| || ||||| |||||| || | | || || |||||||| || ||||| Sbjct 3658579 ACAAGCGAAGTCAGTGTGCATACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTGAG 3658520 Query 50019 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAA 50078 || ||||| ||||||||||| || |||||||| || | || || || || || ||||| Sbjct 3658519 CCCTGGCATGAGGCCACGCTTCTTCAGCCAAAAGATTGCAGCGAAGGATCCCGAGAAGAA 3658460 Query 50079 GATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCG---CTGTCATG 50135 ||| || || || ||||| ||||| | |||| | | ||| | |||| Sbjct 3658459 GATACCCTCGACGGCGGCGAAGGCGATGAGTCGGCAGGCGAAGGTGGAGTTTTTGTCGCT 3658400 Query 50136 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 50195 ||||| ||||||| || |||||||| | || || || | || ||||| || Sbjct 3658399 GATCCATCGAAGAGCCCAGTCAGCCTTCTTACGGATGCATGGAATGTTGTCGATGGCGTT 3658340 Query 50196 AAAGAGATAGtt--tttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATAC 50253 || || ||| | | || | | || | | || || ||||| | ||| || Sbjct 3658339 GAACAGGTAGGTACGCTGTCGTGGC--TCGCTGATGTATGTGTCGATGAGGAGAGAGTAT 3658282 Query 50254 ATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTA 50313 | || || || ||||| || || ||||| || |||||||| |||| |||||| | Sbjct 3658281 GTCTCAGAGTGGATGTTCTCCATCATAATCTGGAAGCCGTAGAAGCATCGAGCCTCTGGG 3658222 Query 50314 ATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCT 50373 ||||| || || || |||||||| | | || || || || ||||||||| || Sbjct 3658221 ATCTGGACCTCACCACTGAATCGTTCGACGAGGTTCTCGTTGACGATTCCGTCAGATGCA 3658162 Query 50374 GCAAAAAACGCCAATACATG---TTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTC 50430 ||||| || || | || || | || | | |||| | | | || ||| Sbjct 3658161 GCAAAGAATGCAAGCACGTGAGAGACGAAGAAGCGCTCATCGTCGTTCAATCGCTTGTTC 3658102 Query 50431 CAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCC 50490 || || | | || || || | || | ||| || | ||||| ||||| ||||| ||| Sbjct 3658101 CAGTCGTGAAGGTCCTTTGACAGGTCAATTTCCTCAGCCGTCCAGAATGACGCCTCGGCC 3658042 Query 50491 TTTTTATACATATTCCAGAT 50510 || || ||||| | |||||| Sbjct 3658041 TTCTTGTACATCTGCCAGAT 3658022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268674302960