Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15] 14 sequences; 19,024,943 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq12 260 2e-64 seq11 149 9e-31 >seq12 Length=4887340 Score = 260 bits (288), Expect = 2e-64 Identities = 584/866 (67%), Gaps = 37/866 (4%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| | |||||||| ||||| |||| || || ||||||| || || | || ||| Sbjct 3658022 ATCTGGCAGATGTACAAGAAGGCCGAGGCGTCATTCTGGACGGCTGAGGAAATTGACCTG 3658081 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 || |||||||| |||| ||| | | || |||| || |||||| || | || Sbjct 3658082 TCAAAGGACCTTCACGACTGGAACAAGCGATTGAACGACGATGAGCGCTTCTTCGTCTCT 3658141 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197 ||| | | || |||||||| | || || |||||||||||||| || || || || ||| Sbjct 3658142 CACGTGCTTGCATTCTTTGCTGCATCTGACGGAATCGTCAACGAGAACCTCGTCGA-ACG 3658200 Query 125198 ATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCATGA 125256 |||| | ||| | || ||||||| ||| ||||| ||||| ||||| || |||| Sbjct 3658201 ATTCAGTGGTGAGGTCCAGATCCCAGAGGC-TCGATGCTTCTACGGCTTCCAGATTATGA 3658259 Query 125257 TTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCGC 125316 | |||||| | ||||| || | |||||| || || |||| ||||| |||| || | Sbjct 3658260 TGGAGAACATCCACTCTGAGACATACTCTCTCCTCATCGACACATACATCAGCGAGCCAC 3658319 Query 125317 AAC---GTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGG 125373 || ||| || || || ||||| ||||||| | || | || ||||| |||| Sbjct 3658320 GACAGCGTACCTACCTGTTC---AACGCCATCGACAACATTCCATGCATCCGTAAGAAGG 3658376 Query 125374 CTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGG 125433 || | |||| |||| |||||| ||| | || || | | |||| | |||| | | Sbjct 3658377 CTGACTGGGCTCTTCGATGGATCAGCGACAAAAACTCCACCTTCGCCTGCCGACTCATCG 3658436 Query 125434 CATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCA 125493 | ||||||||||| ||||| |||||||| ||||| || || || ||||||||||| | Sbjct 3658437 CCTTCGCCGCCGTCGAGGGTATCTTCTTCTCGGGATCCTTCGCTGCAATCTTTTGGCTGA 3658496 Query 125494 AGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGG 125553 ||||||| || |||||||| || || || | |||||| | || ||||| || |||| Sbjct 3658497 AGAAGCGTGGCCTCATGCCAGGGCTCACCTTCTCCAACGAGCTCATCTCTCGTGATGAGG 3658556 Query 125554 GCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGCAGAT 125613 | | ||| |||||| || ||| || || || || | || ||| Sbjct 3658557 GTATGCACACTGACTTCGCTTGTCTTCTCTT------CTCTCACC--------TGAAGAA 3658602 Query 125614 CCAGCGATGAAA--AGGTCATC---AACATTGTAACCGATGCCGTGAGGATAGAACAAGA 125668 | ||| | | || || || || | ||| | ||||| || || | || || ||||| Sbjct 3658603 CAAGCCAAGCAAGGAGCTCGTCCAGAGCATCATCACCGAGGCAGTCACAATCGAGCAAGA 3658662 Query 125669 GTTTCTAACCGAATCCCTACCGGTCAGCA-TGATTGGCATGAACTGCAAGCTAATGTGCG 125727 ||| || || || | || || | ||| || | |||||||||| ||||| |||||| Sbjct 3658663 GTTCCTGACGGATGCTCT-CCCTTGTGCATTGCTCGGCATGAACTCTAAGCTCATGTGCC 3658721 Query 125728 AGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGG---CCGCAAGATTT 125784 | ||||| || || || || || || || || || |||| | |||| | Sbjct 3658722 AATACATCGAATTCGTTGCTGACCGCCTGTTGCTCG---CCCTTGGCAACACCAAGTACT 3658778 Query 125785 ACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACT 125844 ||||||| || || || || |||||| | ||| || || | || ||||| |||| Sbjct 3658779 ACAACGCTGTCAACCCATTCGACTTCATGGAGAACATCTCGCTTGCTGGCAAGACGAACT 3658838 Query 125845 TTTTCGAGAAGAAGGTCAGCGAGTAC 125870 | ||||||||| ||| |||| ||| Sbjct 3658839 TCTTCGAGAAGCGTGTCGGCGACTAC 3658864 >seq11 Length=3629084 Score = 149 bits (164), Expect = 9e-31 Identities = 347/517 (67%), Gaps = 10/517 (2%) Strand=Plus/Plus Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATGCAATGTCACGA 96866 || ||||||| ||| || || || || ||||| || ||| ||| | | ||| Sbjct 2142720 ACCAACGGCACGTCCAACGGTCTCGTCCCTATGCTGCGAGTGTTCAACAACACCGCCCGA 2142779 Query 96867 TACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGG 96926 |||||| ||||||||||| ||||| ||||| || | ||| |||||||||| || ||| Sbjct 2142780 TACGTTGACCAGGGCGGCAACAAACGACCAGGTGCATTCGCCATCTACTTGGAGCCATGG 2142839 Query 96927 CACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGA 96986 ||||| || || |||| ||| |||| | ||||| || ||| ||||||| || Sbjct 2142840 CACGCCGATGTGTTTGCCTTCCTCGACCTCCGCAAGAATCACGGCAAGGAAGAGGTTCGC 2142899 Query 96987 GCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGAC 97046 || | || | || || || |||||| | |||||| | ||||||||||| ||| | | Sbjct 2142900 GCTCGCGATCTCTTCTACGCCCTCTGGATACCAGATCTCTTCATGAAGCGTGTCGAGTCC 2142959 Query 97047 GGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGC 97106 ||| | |||| || ||||| || | || ||||| || | ||| || || Sbjct 2142960 AACGGCGAGTGGACTCTCATGTGTCCAAATGAGTGCCCCGGCCTTGCAGATGTCTATGGA 2143019 Query 97107 GAAGAGTTTGAGGCCAAG---TACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGACG 97162 || ||||||||| ||| ||| | || ||| ||||| || |||||||| Sbjct 2143020 GAGGAGTTTGAG---AAGCTCTACGAGCAGTATGAGGGCGAGGGTCGTGGTCGTGAGAC- 2143075 Query 97163 AGTCGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTC 97221 || || | |||| || ||| | || ||| | | |||| |||||||| || | Sbjct 2143076 TGTGCGCGC-CCAGAAGCTCTGGTACGCTATCCTTGAGTCTCAAACCGAGACTGGCACCC 2143134 Query 97222 CGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCA 97281 | ||||| |||||||||||| | || ||||| |||||||| || | ||||| | Sbjct 2143135 CATACATGCTCTACAAGGATGCTTGTAACCGCAAGAGCAACCAGAAGAACCTTGGCACTA 2143194 Query 97282 TCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTA 97318 || ||||||| ||||||| || || | ||||| Sbjct 2143195 TCCGCAGCTCCAACTTGTGCACCGAGATCATCGAGTA 2143231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741059070314640