Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15]
14 sequences; 19,024,943 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq12 260 2e-64
seq11 149 9e-31
>seq12
Length=4887340
Score = 260 bits (288), Expect = 2e-64
Identities = 584/866 (67%), Gaps = 37/866 (4%)
Strand=Plus/Plus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| | |||||||| ||||| |||| || || ||||||| || || | || |||
Sbjct 3658022 ATCTGGCAGATGTACAAGAAGGCCGAGGCGTCATTCTGGACGGCTGAGGAAATTGACCTG 3658081
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
|| |||||||| |||| ||| | | || |||| || |||||| || | ||
Sbjct 3658082 TCAAAGGACCTTCACGACTGGAACAAGCGATTGAACGACGATGAGCGCTTCTTCGTCTCT 3658141
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197
||| | | || |||||||| | || || |||||||||||||| || || || || |||
Sbjct 3658142 CACGTGCTTGCATTCTTTGCTGCATCTGACGGAATCGTCAACGAGAACCTCGTCGA-ACG 3658200
Query 125198 ATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCATGA 125256
|||| | ||| | || ||||||| ||| ||||| ||||| ||||| || ||||
Sbjct 3658201 ATTCAGTGGTGAGGTCCAGATCCCAGAGGC-TCGATGCTTCTACGGCTTCCAGATTATGA 3658259
Query 125257 TTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCGC 125316
| |||||| | ||||| || | |||||| || || |||| ||||| |||| || |
Sbjct 3658260 TGGAGAACATCCACTCTGAGACATACTCTCTCCTCATCGACACATACATCAGCGAGCCAC 3658319
Query 125317 AAC---GTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGG 125373
|| ||| || || || ||||| ||||||| | || | || ||||| ||||
Sbjct 3658320 GACAGCGTACCTACCTGTTC---AACGCCATCGACAACATTCCATGCATCCGTAAGAAGG 3658376
Query 125374 CTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGG 125433
|| | |||| |||| |||||| ||| | || || | | |||| | |||| | |
Sbjct 3658377 CTGACTGGGCTCTTCGATGGATCAGCGACAAAAACTCCACCTTCGCCTGCCGACTCATCG 3658436
Query 125434 CATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCA 125493
| ||||||||||| ||||| |||||||| ||||| || || || ||||||||||| |
Sbjct 3658437 CCTTCGCCGCCGTCGAGGGTATCTTCTTCTCGGGATCCTTCGCTGCAATCTTTTGGCTGA 3658496
Query 125494 AGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGG 125553
||||||| || |||||||| || || || | |||||| | || ||||| || ||||
Sbjct 3658497 AGAAGCGTGGCCTCATGCCAGGGCTCACCTTCTCCAACGAGCTCATCTCTCGTGATGAGG 3658556
Query 125554 GCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGCAGAT 125613
| | ||| |||||| || ||| || || || || | || |||
Sbjct 3658557 GTATGCACACTGACTTCGCTTGTCTTCTCTT------CTCTCACC--------TGAAGAA 3658602
Query 125614 CCAGCGATGAAA--AGGTCATC---AACATTGTAACCGATGCCGTGAGGATAGAACAAGA 125668
| ||| | | || || || || | ||| | ||||| || || | || || |||||
Sbjct 3658603 CAAGCCAAGCAAGGAGCTCGTCCAGAGCATCATCACCGAGGCAGTCACAATCGAGCAAGA 3658662
Query 125669 GTTTCTAACCGAATCCCTACCGGTCAGCA-TGATTGGCATGAACTGCAAGCTAATGTGCG 125727
||| || || || | || || | ||| || | |||||||||| ||||| ||||||
Sbjct 3658663 GTTCCTGACGGATGCTCT-CCCTTGTGCATTGCTCGGCATGAACTCTAAGCTCATGTGCC 3658721
Query 125728 AGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGG---CCGCAAGATTT 125784
| ||||| || || || || || || || || || |||| | |||| |
Sbjct 3658722 AATACATCGAATTCGTTGCTGACCGCCTGTTGCTCG---CCCTTGGCAACACCAAGTACT 3658778
Query 125785 ACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACT 125844
||||||| || || || || |||||| | ||| || || | || ||||| ||||
Sbjct 3658779 ACAACGCTGTCAACCCATTCGACTTCATGGAGAACATCTCGCTTGCTGGCAAGACGAACT 3658838
Query 125845 TTTTCGAGAAGAAGGTCAGCGAGTAC 125870
| ||||||||| ||| |||| |||
Sbjct 3658839 TCTTCGAGAAGCGTGTCGGCGACTAC 3658864
>seq11
Length=3629084
Score = 149 bits (164), Expect = 9e-31
Identities = 347/517 (67%), Gaps = 10/517 (2%)
Strand=Plus/Plus
Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATGCAATGTCACGA 96866
|| ||||||| ||| || || || || ||||| || ||| ||| | | |||
Sbjct 2142720 ACCAACGGCACGTCCAACGGTCTCGTCCCTATGCTGCGAGTGTTCAACAACACCGCCCGA 2142779
Query 96867 TACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGG 96926
|||||| ||||||||||| ||||| ||||| || | ||| |||||||||| || |||
Sbjct 2142780 TACGTTGACCAGGGCGGCAACAAACGACCAGGTGCATTCGCCATCTACTTGGAGCCATGG 2142839
Query 96927 CACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGA 96986
||||| || || |||| ||| |||| | ||||| || ||| ||||||| ||
Sbjct 2142840 CACGCCGATGTGTTTGCCTTCCTCGACCTCCGCAAGAATCACGGCAAGGAAGAGGTTCGC 2142899
Query 96987 GCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGAC 97046
|| | || | || || || |||||| | |||||| | ||||||||||| ||| | |
Sbjct 2142900 GCTCGCGATCTCTTCTACGCCCTCTGGATACCAGATCTCTTCATGAAGCGTGTCGAGTCC 2142959
Query 97047 GGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGC 97106
||| | |||| || ||||| || | || ||||| || | ||| || ||
Sbjct 2142960 AACGGCGAGTGGACTCTCATGTGTCCAAATGAGTGCCCCGGCCTTGCAGATGTCTATGGA 2143019
Query 97107 GAAGAGTTTGAGGCCAAG---TACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGACG 97162
|| ||||||||| ||| ||| | || ||| ||||| || ||||||||
Sbjct 2143020 GAGGAGTTTGAG---AAGCTCTACGAGCAGTATGAGGGCGAGGGTCGTGGTCGTGAGAC- 2143075
Query 97163 AGTCGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTC 97221
|| || | |||| || ||| | || ||| | | |||| |||||||| || |
Sbjct 2143076 TGTGCGCGC-CCAGAAGCTCTGGTACGCTATCCTTGAGTCTCAAACCGAGACTGGCACCC 2143134
Query 97222 CGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCA 97281
| ||||| |||||||||||| | || ||||| |||||||| || | ||||| |
Sbjct 2143135 CATACATGCTCTACAAGGATGCTTGTAACCGCAAGAGCAACCAGAAGAACCTTGGCACTA 2143194
Query 97282 TCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTA 97318
|| ||||||| ||||||| || || | |||||
Sbjct 2143195 TCCGCAGCTCCAACTTGTGCACCGAGATCATCGAGTA 2143231
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741059070314640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |