Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15] 14 sequences; 19,024,943 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq13 105 2e-17 seq6 105 2e-17 seq12 100 7e-16 >seq13 Length=2085791 Score = 105 bits (116), Expect = 2e-17 Identities = 140/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 || |||||||| || |||||||| | || | ||||| || || || |||||||| || Sbjct 973818 TCCTTCTGAATGTTGTAGTCAGACAACGTACGGCCGTCCTCGAGCTGCTTTCCAGCGAAG 973759 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT-ACATT 104487 || || | ||| ||||| || || || || || || || |||||||| ||| || ||||| Sbjct 973758 ATGAGACGCTGCTGATCTGGTGGAATACCCTCCTTGTCTTGAATCTT-GCTCTTCACATT 973700 Query 104488 TTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTAC 104547 || | || || | || || |||| |||||||||||| ||||| || || || || Sbjct 973699 GTCGATTGTGTCCGATGACTCGACTTCTAATGTAATAGTCTTGCCAGTGAGAGTCTTGAC 973640 Query 104548 AAATATCTGCAT 104559 || || ||||| Sbjct 973639 GAAGATTTGCAT 973628 Score = 100 bits (110), Expect = 7e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || |||| || | ||| || ||||| | || || || |||||||| || ||||| Sbjct 973629 ATACCACCTCGCAGACGAAGAACGAGATGCAGAGTGGACTCCTTCTGAATGTTGTAGTCG 973570 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || ||||| | || || || || || || ||||| || || | | ||| || || || Sbjct 973569 GACAGAGTACGGCCATCCTCAAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCTGGT 973510 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || || || || ||||||||||| | || || || || | || || | || Sbjct 973509 GGAATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATAGTGTCAGAGGACTCA 973450 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || || || ||||| ||||| || || || ||||| || ||||| Sbjct 973449 ACCTCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACAAAGATTTGCAT 973400 >seq6 Length=1630888 Score = 105 bits (116), Expect = 2e-17 Identities = 158/222 (71%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || |||| || || || || ||||| | ||| || || ||||| || || ||||| Sbjct 190440 ATACCACCTCGAAGTCTGAGCACAAGATGAAGTGTCGACTCCTTCTGGATGTTGTAGTCT 190499 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || || | || || || || || ||||| ||||| || || | || || || || Sbjct 190500 GAGAGCGTGCGGCCATCCTCGAGCTGCTTTCCGGCAAAGATAAGACGTTGCTGGTCTGGT 190559 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCT-TTTACATTTTCTACGGTATCGCTAGGTTC 104508 || || || ||||||||||||||| ||||| || ||||| || | |||||| | || Sbjct 190560 GGAATGCCCTCTTTATCCTGAATC-TTGCTCTTCACATTGTCGATAGTATCGGAGGACTC 190618 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAA 104550 ||||| || || || ||||| || || || || || || || Sbjct 190619 AACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGAA 190660 >seq12 Length=4887340 Score = 100 bits (110), Expect = 7e-16 Identities = 126/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || ||||| || ||||| | |||||| || || || ||||| Sbjct 1403612 GTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGACCGTCCTCAAGCTGCTTTCCG 1403671 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || | ||| || || || ||||| || || || || |||||||||| || Sbjct 1403672 GCGAAGATCAGACGCTGCTGGTCTGGTGGTATGCCCTCCTTGTCTTGAATCTTTGACTTG 1403731 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGT 104535 ||||| || | || || || || ||||| || || ||||||||||| || Sbjct 1403732 ACATTGTCGATTGTGTCTGAAGACTCCACCTCGAGGGTGATAGTCTTACCCGT 1403784 Score = 89.7 bits (98), Expect = 1e-12 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 269141 GCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTG 269200 || || ||||| || || ||||| ||||| ||||| || || || || ||||||||| || Sbjct 3658436 GCCTTCGCCGCCGTCGAGGGTATCTTCTTCTCGGGATCCTTCGCTGCAATCTTTTGGCTG 3658495 Query 269201 AAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAA 269260 ||||| | ||||| |||||||| | || ||||| ||||| | || | || || Sbjct 3658496 AAGAAGCGTGGCCTCATGCCAGGGCTCACCTTCTCCAACGAGCTCATCTCTCGTGATGAG 3658555 Query 269261 GGTTTACACTGCGACTTCGCTTGT 269284 ||| | ||| |||||||||||| Sbjct 3658556 GGTATGCACACTGACTTCGCTTGT 3658579 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151398193467912