Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15] 14 sequences; 19,024,943 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq12 170 3e-38 >seq12 Length=4887340 Score = 170 bits (188), Expect = 3e-38 Identities = 200/268 (75%), Gaps = 2/268 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| || | ||||| | ||||| |||||||| || ||||||||||||||||| Sbjct 3853707 GCCAAGCGTCACCGAAAGATCT-TGCGAGACAACATCCAGGGTATCACCAAGCCAGCTAT 3853765 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||| |||||||||||||| ||||||||| |||| | || |||| || |||| Sbjct 3853766 CCGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCAGCCATGATCTACGAGGAGAC 3853825 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||| | ||| | |||| ||||||| || | || | ||| || || || ||||| Sbjct 3853826 TCGCGGTGTCCTCAAGACCTTCCTCGAGGGAATCATTCGTGACGCAGTCACATACACCGA 3853885 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||| || ||||| | || | ||||| || | || || || || Sbjct 3853886 GCACGCCAAGCGCAAGACAGTGACCTCTCTCGACGTTGTCTACGCTCTCAAGCGACAGGG 3853945 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 ||||| | || ||||| || ||||| Sbjct 3853946 CCGTACTCTCTACGGTTTCGGTGGTTAA 3853973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075187199702