Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15]
14 sequences; 19,024,943 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq13 123 2e-23
seq6 91.5 1e-13
seq12 86.0 6e-12
>seq13
Length=2085791
Score = 123 bits (136), Expect = 2e-23
Identities = 149/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|||||||| | ||| || |||| || | ||| |||||||| ||||||||||||||
Sbjct 973398 CCACCGCGAAGACGAAGGACTAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAATCCGAG 973339
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| ||||| |||||||||||||| |||| || ||||||||||| || ||
Sbjct 973338 AGGGTGCGGCCATCCTCAAGCTGCTTGCCTGCAAAGATCAAGCGCTGCTGGTCAGGTGGA 973279
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||| ||||| ||| || ||||| | || | ||||| | ||||||||
Sbjct 973278 ATGCCTTCCTTGTCCTGGATCTTTGACTTGACGTTGTCGATGGTATCTGAGGACTCGACC 973219
Query 131188 TCGACGGTAACGGTTTTACCGGT 131210
|| | ||| | ||| || || ||
Sbjct 973218 TCAAGGGTGATGGTCTTGCCAGT 973196
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| ||| || || | ||| | || |||||||| ||||||||||| ||| |
Sbjct 973626 CCACCTCGCAGACGAAGAACGAGATGCAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAC 973567
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || ||||| |||||||| || ||| |||| || ||||||||||| || ||
Sbjct 973566 AGAGTACGGCCATCCTCAAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCTGGTGGA 973507
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| || ||| ||||| | || | ||| || | |||||| |
Sbjct 973506 ATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATAGTGTCAGAGGACTCAACC 973447
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | ||| || || || ||||| || || || || |||||
Sbjct 973446 TCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACAAAGATTTGCAT 973400
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
|||||| || | ||| ||||| || || | ||| |||||| ||||||||||| ||
Sbjct 973855 GCCACCACGAAGACGAAGCACCAAGTGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCAGA 973796
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
|| || || |||||| |||||||| || ||| |||| | ||||||||| || || ||
Sbjct 973795 CAACGTACGGCCGTCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCTGGTGG 973736
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
|| || || ||||| || || ||| | | || | || || | |||||||
Sbjct 973735 AATACCCTCCTTGTCTTGAATCTTGCTCTTCACATTGTCGATTGTGTCCGATGACTCGAC 973676
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | |||| || || || || ||||| || ||||| || |||||
Sbjct 973675 TTCTAATGTAATAGTCTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 973628
>seq6
Length=1630888
Score = 91.5 bits (100), Expect = 1e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 131023 AGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCC 131082
||||| | ||| | ||||||||||| || |||||||| || | ||||| |||
Sbjct 190458 AGCACAAGATGAAGTGTCGACTCCTTCTGGATGTTGTAGTCTGAGAGCGTGCGGCCATCC 190517
Query 131083 TCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCG 131142
|| |||||||| || || |||| | ||| |||||||| || || || || ||||| ||
Sbjct 190518 TCGAGCTGCTTTCCGGCAAAGATAAGACGTTGCTGGTCTGGTGGAATGCCCTCTTTATCC 190577
Query 131143 GTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTT 131202
|| || ||| | | || | |||||||| |||||| | |||| ||| | |||
Sbjct 190578 TGAATCTTGCTCTTCACATTGTCGATAGTATCGGAGGACTCAACCTCGAGGGTGATGGTC 190637
Query 131203 TTACCGGTTAGAGTTTTTACGAA 131225
|| || || || || || |||||
Sbjct 190638 TTGCCCGTGAGGGTCTTCACGAA 190660
>seq12
Length=4887340
Score = 86.0 bits (94), Expect = 6e-12
Identities = 143/204 (70%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | || || || | || | ||| |||||||| || |||||||| |||
Sbjct 1403582 CCACCACGAAGTCGTAGGACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAA 1403641
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| |||||| |||||||| || ||| |||| | |||||||||||| || ||
Sbjct 1403642 AGAGTGCGACCGTCCTCAAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGTGGT 1403701
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
|| || || ||||| ||| | | || ||||| | || | || || | ||||| |
Sbjct 1403702 ATGCCCTCCTTGTC-TTGAATCTTTGACTTGACATTGTCGATTGTGTCTGAAGACTCCAC 1403760
Query 131187 GTCGACGGTAACGGTTTTACCGGT 131210
|||| ||| | || ||||| ||
Sbjct 1403761 CTCGAGGGTGATAGTCTTACCCGT 1403784
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472012717397760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |