Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15]
14 sequences; 19,024,943 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq13 98.7 8e-16
seq6 82.4 6e-11
>seq13
Length=2085791
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| ||||| || | || || | |||||| ||||||||||| || ||||||||||||| |
Sbjct 973626 CCACCTCGCAGACGAAGAACGAGATGCAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAC 973567
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| || | | ||||| | || || || || | || | ||||| ||||| ||
Sbjct 973566 AGAGTACGGCCATCCTCAAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCTGGTGGA 973507
Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888
| |||||| ||||| ||| | | ||| || | | | | |||||| || |||
Sbjct 973506 ATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATAGTGTCAGAGGACTCAACC 973447
Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| | ||||||||| || || ||||| || |||||||| || |||||
Sbjct 973446 TCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACAAAGATTTGCAT 973400
>seq6
Length=1630888
Score = 82.4 bits (90), Expect = 6e-11
Identities = 151/219 (69%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| ||||| || || || || | ||| || || |||||||| || ||||||||||| |
Sbjct 190443 CCACCTCGAAGTCTGAGCACAAGATGAAGTGTCGACTCCTTCTGGATGTTGTAGTCTGAG 190502
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| || | | ||||| | || || || ||| | ||||| || || ||||| ||
Sbjct 190503 AGCGTGCGGCCATCCTCGAGCTGCTTTCCGGCAAAGATAAGACGTTGCTGGTCTGGTGGA 190562
Query 16829 ACGCCCTCTTTGTCGGCAAT-TTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGT 16887
| ||||||||| || ||| ||||| |||||| | | | | ||| ||| || |||
Sbjct 190563 ATGCCCTCTTTATCCTGAATCTTGCT-CTTCACATTGTCGATAGTATCGGAGGACTCAAC 190621
Query 16888 TTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAA 16926
|| | ||||||||| || || || || || || || ||
Sbjct 190622 CTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGAA 190660
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405087930881860
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |