Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15] 14 sequences; 19,024,943 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq8 140 2e-28 seq10 105 4e-18 seq13 104 2e-17 >seq8 Length=8731 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 7358 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 7299 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 7298 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 7264 >seq10 Length=922471 Score = 105 bits (116), Expect = 4e-18 Identities = 201/294 (68%), Gaps = 4/294 (1%) Strand=Plus/Minus Query 6195 GACGCGTTCTACCGCTACAAAATGCCGCGCATCTGCG--CCAAGGTCGAGGGTAAGGGAA 6252 ||| | ||||| || ||||| ||| ||| | ||| | ||||||||||| ||||| | Sbjct 585047 GACCCCTTCTATCGATACAAGATGGAGCG--TTTGCAGTCTAAGGTCGAGGGCAAGGGCA 584990 Query 6253 ACGGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTG 6312 ||||||| || || || |||||||| | | | || ||| || || | ||| ||| Sbjct 584989 ACGGTATCAAGACTGTTGTTGTCAACCTAAGTAACGTTGCTCAGCAACTTGCACGTCCTC 584930 Query 6313 CCACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACA 6372 | | ||| | || || ||||| | ||||||||||| || || | | |||| | Sbjct 584929 CAAGCTATGTCATCAAGTACTTCGGCTTTGAACTTGGCGCCCAAACCAACATCGATCCAA 584870 Query 6373 AAAACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTG 6432 | |||| |||| ||| | ||||| || || | | |||||| ||||||| || | Sbjct 584869 AGGACGACCGCTGGATCATCAACGGGTCCCACGAGGCGAGCAAGCTTCAGGACTATCTAG 584810 Query 6433 ACGGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCG 6486 | ||||| || ||||| || || |||| | | ||| | ||||| ||||||| Sbjct 584809 ATGGCTTCATCACAAAGTTCGTTCTTTGTCAGAAGTGCAAGAACCCTGAGACCG 584756 >seq13 Length=2085791 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| | | ||| | |||||| || | ||||||||||| ||||| ||||| |||||| Sbjct 973854 CCACCACGAAGACGAAGCACCAAGTGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCAGAC 973795 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 || ||| |||| || | || ||||| || || || || || || ||||| | || Sbjct 973794 AACGTACGGCCGTCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCTGGTGGA 973735 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | || || ||||| ||| || ||||||||| | || || || || ||| Sbjct 973734 ATACCCTCCTTGTCTTGAATCTTGCTCTTCACATTGTCGATTGTGTCCGATGACTCGACT 973675 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||||||||||||| || || || | || || ||||| || ||||| Sbjct 973674 TCTAATGTAATAGTCTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 973628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334947142849634