Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15] 14 sequences; 19,024,943 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq11 188 9e-43 seq12 100 4e-16 >seq11 Length=3629084 Score = 188 bits (208), Expect = 9e-43 Identities = 482/726 (66%), Gaps = 12/726 (2%) Strand=Plus/Minus Query 62993 TCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGAC 63052 || ||||| ||||| | |||| | || || || || |||| |||||||| | | | Sbjct 2143030 TCAAACTCCTCTCCATAGACATCTGCAAGGCCGGGGCACTCATTTGGACACATGAGAGTC 2142971 Query 63053 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63112 ||||| |||| || || || ||||| |||||||| || ||||| || || || Sbjct 2142970 CACTCGCCGTTGGACTCGACACGCTTCATGAAGAGATCTGGTATCCAGAGGGCGTAGAAG 2142911 Query 63113 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63172 ||||| | | | | || || || || |||||| || |||||||| || | Sbjct 2142910 AGATCGCGAGCGCGAACCTCTTCCTTGCCGTGATTCTTGCGGAGGTCGAGGAAGGCAAAC 2142851 Query 63173 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63232 | ||| | ||||| || |||||||| ||||| | | || || |||||||| || ||| Sbjct 2142850 ACATCGGCGTGCCATGGCTCCAAGTAGATGGCGAATGCACCTGGTCGTTTGTTGCCGCCC 2142791 Query 63233 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 63292 || || | ||||| |||||||| || | |||| || ||| || | | ||| ||||| Sbjct 2142790 TGGTCAACGTATCGGGCGGTGTTGTTGAACACTCGCAGCATAGGGACGAGACCGTTGGAC 2142731 Query 63293 GTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAAT---AT-TACTAATTGATAG 63348 || || ||||| || ||| || ||||| |||||||| || | | |||| | Sbjct 2142730 GTGCCGTTGGTGCCACTGATGTATGAACCACTAGCACGAATGCGATGTGCG--TTGA--G 2142675 Query 63349 ACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCC 63408 ||| | || || || |||| ||||| | ||||| || | ||| || |||||||| Sbjct 2142674 ACCGACGCCACCAGCATTTTTTGAGATCATAGCGCAAGTCTTGAGCGTGTCGTAGATGCC 2142615 Query 63409 CTCTATACTATCATCCATCATGTTAAGTAGAAAACA-GCT-AGACATTTGGTGACGACTA 63466 ||| || || || ||| |||||| | || || || | | || | || | | Sbjct 2142614 CTCAATGCTGTCCTCCTTCATGTCGACAAGGAAGCATGATGCGAGCTGTGCT--TGTGGT 2142557 Query 63467 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTG 63526 || || || ||| | || || || ||||| || || | || | || | || ||| Sbjct 2142556 GTGCCAGCGGCAAAGAGCGTTGGCGAGGCGTGTGTGAAGTACTTGTTGGACATGAGGTTG 2142497 Query 63527 TACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAAC 63586 || || || || || | || || ||| | ||| || || || || |||||||| | | Sbjct 2142496 TAAGTTTCGATGGCAGCCTCAATGTCCTCTCCATGTATACCGACAGCCACACGCATAATC 2142437 Query 63587 ATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAA 63646 |||||||| |||| ||| | |||||| | | || ||| | ||| ||| |||| | Sbjct 2142436 ATGTGCTGTGGTCGTTCTGCAATCTTGCCGCTGATGCGCAAGAGGTATGATCGCTCCAGA 2142377 Query 63647 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGT 63706 || || |||||||| || | ||| |||||||| ||||| | || | ||||| || Sbjct 2142376 GTCTTGAAACCAAAGTACTGGTAGTTGAAGTCTCGGTCGTACACGATGGCAGAGTTCAGC 2142317 Query 63707 TTATCC 63712 | |||| Sbjct 2142316 TCATCC 2142311 >seq12 Length=4887340 Score = 100 bits (110), Expect = 4e-16 Identities = 360/560 (64%), Gaps = 10/560 (2%) Strand=Plus/Minus Query 32660 ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAG 32719 ||| ||||| || ||| | |||||| || | | || | |||||||| || ||||| Sbjct 3658579 ACAAGCGAAGTCAGTGTGCATACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTGAG 3658520 Query 32720 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAA 32779 || ||||| ||||||||||| || |||||||| || | || || ||||| || ||||| Sbjct 3658519 CCCTGGCATGAGGCCACGCTTCTTCAGCCAAAAGATTGCAGCGAAGGATCCCGAGAAGAA 3658460 Query 32780 AATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG---CTGTCATG 32836 || || || || || || ||||| || |||| | | || | |||| Sbjct 3658459 GATACCCTCGACGGCGGCGAAGGCGATGAGTCGGCAGGCGAAGGTGGAGTTTTTGTCGCT 3658400 Query 32837 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATT 32896 ||||| ||||||| || |||||||| | || || || | || || || || Sbjct 3658399 GATCCATCGAAGAGCCCAGTCAGCCTTCTTACGGATGCATGGAATGTTGTCGATGGCGTT 3658340 Query 32897 AAAGAGATAGtt--tttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATAC 32954 || || ||| | | || | | || | | ||||| || || | ||| || Sbjct 3658339 GAACAGGTAGGTACGCTGTCGTGGC--TCGCTGATGTATGTGTCGATGAGGAGAGAGTAT 3658282 Query 32955 ATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTA 33014 | || || || ||||| || || || || || ||||||||||||| |||||| | Sbjct 3658281 GTCTCAGAGTGGATGTTCTCCATCATAATCTGGAAGCCGTAGAAGCATCGAGCCTCTGGG 3658222 Query 33015 ATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCT 33074 ||||| || || || |||||||| | | || || || || ||||||||| || Sbjct 3658221 ATCTGGACCTCACCACTGAATCGTTCGACGAGGTTCTCGTTGACGATTCCGTCAGATGCA 3658162 Query 33075 GCAAAAAACGCCAATACATGTTTTATAAAATA---TTTTTCGTCTGGTGTTAGTTTATTC 33131 ||||| || || | || || | || | | ||||| | | || ||| Sbjct 3658161 GCAAAGAATGCAAGCACGTGAGAGACGAAGAAGCGCTCATCGTCGTTCAATCGCTTGTTC 3658102 Query 33132 CAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCC 33191 || || | | || || || | || | ||| || | ||||| ||||| ||||| ||| Sbjct 3658101 CAGTCGTGAAGGTCCTTTGACAGGTCAATTTCCTCAGCCGTCCAGAATGACGCCTCGGCC 3658042 Query 33192 TTTTTATACATATTCCAGAT 33211 || || ||||| | |||||| Sbjct 3658041 TTCTTGTACATCTGCCAGAT 3658022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631889114400