Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15] 14 sequences; 19,024,943 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq13 116 3e-21 >seq13 Length=2085791 Score = 116 bits (128), Expect = 3e-21 Identities = 155/213 (73%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| |||||| |||| || || ||||||| | || || ||||| ||| Sbjct 973400 ATGCAAATCTTTGTCAAGACTCTGACTGGCAAGACCATCACCCTTGAGGTTGAGTCCTCT 973459 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||||||||| | ||| | || | ||| ||||| || || |||||||| ||||| Sbjct 973460 GACACTATCGACAACGTCAAGTCGAAGATTCA-GGACAAGGAGGGCATTCCACCAGACCA 973518 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| | || || || || || || | || |||| || ||| || ||| ||||| Sbjct 973519 GCAGCGATTGATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGTACTCTGTCCGACTACAA 973578 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||| || || ||||| || ||| | || || Sbjct 973579 CATTCAGAAGGAGTCCACTCTGCATCTCGTTCT 973611 Score = 87.8 bits (96), Expect = 2e-12 Identities = 126/178 (71%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 25033 CCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTGAAGCAAAAAATCACTG 25092 ||||||| | || || ||||| || || || ||||| | ||| ||| ||| | Sbjct 973206 CCATCACCCTTGAGGTCGAGTCCTCAGATACCATCGACAACGTCAAGTCAAAGATCCAGG 973265 Query 25093 ACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAG 25152 |||| ||||| |||||||||||||| ||||| | || ||||| ||||| || | || | Sbjct 973266 ACAAGGAAGGCATTCCACCTGACCAGCAGCGCTTGATCTTTGCAGGCAAGCAGCTTGAGG 973325 Query 25153 ATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||| ||||| | |||||||| ||||| || || || || || || |||| || Sbjct 973326 ATGGCCGCACCCTCTCGGATTACAACATTCAGAAGGAGTCTACCCTCCACCTAGTCCT 973383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327926063410