Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15] 14 sequences; 19,024,943 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq13 116 3e-21 seq6 105 6e-18 seq12 102 7e-17 >seq13 Length=2085791 Score = 116 bits (128), Expect = 3e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || || || |||| ||||| || || || | |||||| | ||| | |||| | Sbjct 973196 ACTGGCAAGACCATCACCCTTGAGGTCGAGTCCTCAGATACCATCGACAACGTCAAGTCA 973255 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || |||||||| || |||||||| || || || || | || ||||| ||||| Sbjct 973256 AAGATCCAGGACAAGGAAGGCATTCCACCTGACCAGCAGCGCTTGATCTTTGCAGGCAAG 973315 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 ||| | |||||| ||||||| |||| |||||||||||||| || || || ||| | || Sbjct 973316 CAGCTTGAGGATGGCCGCACCCTCTCGGATTACAACATTCAGAAGGAGTCTACCCTCCAC 973375 Query 22423 TTAGTTTTGCGATTGCGCGGAGGT 22446 |||| | || | ||||| ||| Sbjct 973376 CTAGTCCTTCGTCTTCGCGGTGGT 973399 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || ||| | || || || || |||| ||||| || || || | Sbjct 973400 ATGCAAATCTTTGTCAAGACTCTGACTGGCAAGACCATCACCCTTGAGGTTGAGTCCTCT 973459 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | |||| || ||||| ||||||||||| |||||||| || || Sbjct 973460 GACACTATCGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATTCCACCAGACCAG 973519 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || || || || || ||| | |||||| ||| || | ||||| |||||| Sbjct 973520 CAGCGATTGATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGTACTCTGTCCGACTACAAC 973579 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| || || ||||| | ||| | ||| | || |||| || ||| Sbjct 973580 ATTCAGAAGGAGTCCACTCTGCATCTCGTTCTTCGTCTGCGAGGTGGT 973627 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || ||| | || || || || | || | ||||| || | | Sbjct 973628 ATGCAAATCTTCGTCAAGACTCTCACTGGCAAGACTATTACATTAGAAGTCGAGTCATCG 973687 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || | || || |||||||||||||||||||||||||| ||||| Sbjct 973688 GACACAATCGACAATGTGAAGAGCAAGATTCAAGACAAGGAGGGTATTCCACCAGATCAG 973747 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || || || ||| | ||||| ||| || | || || |||||| Sbjct 973748 CAGCGTCTCATCTTCGCTGGAAAGCAGCTCGAGGACGGCCGTACGTTGTCTGACTACAAC 973807 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427 ||||| || || |||| | || || || Sbjct 973808 ATTCAGAAGGAGAGCACCTTGCACTTGGT 973836 >seq6 Length=1630888 Score = 105 bits (116), Expect = 6e-18 Identities = 127/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || || || |||| || || || || || ||||||| | ||| || | || Sbjct 190645 ACGGGCAAGACCATCACCCTCGAGGTTGAGTCCTCCGATACTATCGACAATGTGAAGAGC 190586 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || ||||| || || ||||| |||||||| || || ||||||||||| |||||||| || Sbjct 190585 AAGATTCAGGATAAAGAGGGCATTCCACCAGACCAGCAACGTCTTATCTTTGCCGGAAAG 190526 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415 ||| | |||||| |||||| |||| || |||||||| || || || || || Sbjct 190525 CAGCTCGAGGATGGCCGCACGCTCTCAGACTACAACATCCAGAAGGAGTCGAC 190473 >seq12 Length=4887340 Score = 102 bits (112), Expect = 7e-17 Identities = 127/174 (73%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || ||||| || |||| || || ||||| | | || || | ||| || |||| | Sbjct 1403784 ACGGGTAAGACTATCACCCTCGAGGTGGAGTCTTCAGACACAATCGACAATGTCAAGTCA 1403725 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || ||||||||||||||||| || ||||| || || || ||||| || || ||||| || Sbjct 1403724 AAGATTCAAGACAAGGAGGGCATACCACCAGACCAGCAGCGTCTGATCTTCGCCGGAAAG 1403665 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 ||| | ||||| ||||| | ||||| |||||||| || || || |||||| Sbjct 1403664 CAGCTTGAGGACGGTCGCACTCTTTCCGACTACAACATCCAGAAGGAGTCCACC 1403611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727928383910