Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15] 14 sequences; 19,024,943 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq12 122 2e-22 seq6 84.2 4e-11 >seq12 Length=4887340 Score = 122 bits (134), Expect = 2e-22 Identities = 269/400 (67%), Gaps = 4/400 (1%) Strand=Plus/Minus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||| | || ||||| ||||||||||||||| ||||| Sbjct 3658845 TCGAAGAAGTTCGTCTTGCCAGCAAGCGAGATGTTCTCCATGAAGTCGAATGGGTTGACA 3658786 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 || ||||| | ||||| | |||||| || | || | |||||| || || || || | Sbjct 3658785 GCGTTGTAGTACTTGGTGTTGCCAAGGGCGAGCAACAGGCGGTCAGCAACGAATTCGATG 3658726 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 || || | ||| || | |||||||||||| | || |||||| | || || | | Sbjct 3658725 TATTGGCACATGAGCTTAGAGTTCATGCCGAGCAATGCACAAGGGAGAGCATCCGTCAGG 3658666 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGCCAGAGACAGC 251802 || || | ||| | | |||||||| | || || || | || || Sbjct 3658665 AACTCTTGCTCGATTGTGACTGCCTCGGTGATGATGCTCTGGACGAGCTCCTTGCTTGGC 3658606 Query 251803 TTGTTCTCCAGCTTTGAGTACAGGAG-CTCGCCAA-ACTGTTGGTGCAGACCCTCGTCGC 251860 ||||||| ||| | ||| | || || | || || | || ||||| |||||| || | Sbjct 3658605 TTGTTCTTCAGGTGAGAGAAGAGAAGACAAGCGAAGTCAGT--GTGCATACCCTCATCAC 3658548 Query 251861 GACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAGA 251920 || ||||| ||||||||| | || || ||||| | ||||| ||| | ||||| | Sbjct 3658547 GAGAGATGAGCTCGTTGGAGAAGGTGAGCCCTGGCATGAGGCCACGCTTCTTCAGCCAAA 3658488 Query 251921 AGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGAC 251960 ||||||| |||||||| ||||| | | ||||||||| Sbjct 3658487 AGATTGCAGCGAAGGATCCCGAGAAGAAGATACCCTCGAC 3658448 >seq6 Length=1630888 Score = 84.2 bits (92), Expect = 4e-11 Identities = 133/188 (71%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 280174 TCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCC 280233 |||| || || || ||||| || || || || || ||||| ||||||||||| || | | Sbjct 1359166 TCATCGGTCCAAACGGTGCCGGAAAATCAACGCTCATCAAGGTCCTGACTGGAGA-AACA 1359224 Query 280234 AGGCCACTGAGGGGTCCGTTTG-GAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAG 280292 | |||| | || | | | ||| ||||| ||| |||| || | ||| || ||| Sbjct 1359225 ATCCCACAGTCAGGAAAGGTCGAGAAACATCCTAACCTGCGTATTGGCTACATCAAACAG 1359284 Query 280293 CACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGG 280352 || ||||| | ||| |||||| ||| |||| | ||| || ||||||||| | || ||| Sbjct 1359285 CATGCTTTGGAGCACGTCGAGATGCACATGGAAAAGACACCAAACCAATACCTCCAATGG 1359344 Query 280353 CGCTATGC 280360 || || || Sbjct 1359345 CGTTACGC 1359352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027836615631774