Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15]
14 sequences; 19,024,943 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq12 154 3e-32
seq13 150 3e-31
seq6 134 3e-26
>seq12
Length=4887340
Score = 154 bits (170), Expect = 3e-32
Identities = 157/205 (77%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || ||||| || | |||| ||| || |||||||| || |||||||| || |||||
Sbjct 1403582 CCACCACGAAGTCGTAGGACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAA 1403641
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| |||||||| || || | || ||||| |||||
Sbjct 1403642 AGAGTGCGACCGTCCTCAAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGTGGT 1403701
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| ||||||||||||||||||| |||||| ||||| ||||||| || || ||
Sbjct 1403702 ATGCCCTCCTTGTCTTGAATCTTTGACTTGACATTGTCGATTGTGTCTGAAGACTCCACC 1403761
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGA 68439
|| | |||||| || || |||||||
Sbjct 1403762 TCGAGGGTGATAGTCTTACCCGTGA 1403786
Score = 114 bits (126), Expect = 2e-20
Identities = 286/432 (66%), Gaps = 2/432 (0%)
Strand=Plus/Minus
Query 9971 CTCGAAGAAGTTGGACTTGCCCTCGAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTC 10030
|||||||||||| | |||||| | || || ||| |||||||||||| || ||||| |
Sbjct 3658846 CTCGAAGAAGTTCGTCTTGCCAGCAAGCGAGATGTTCTCCATGAAGTCGAATGGGTTGAC 3658787
Query 10031 GGCGCCAAACTGCTTGGGGTAACCGAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGAT 10090
||| | | ||||| || || || || || | ||||||||| ||||| |||||
Sbjct 3658786 AGCGTTGTAGTACTTGGTGTTGCCAAGGGCGAGCAACAGGCGGTCAGCAACGAATTCGAT 3658727
Query 10091 GTACTGGCTCATCAGGTCCGAGTTCATGCCAATC-ATGCGGCAGGGGATGGCGTCGCAAA 10149
||| |||| ||| || | ||||||||||| | | |||| || |||| || || |
Sbjct 3658726 GTATTGGCACATGAGCTTAGAGTTCATGCCGAGCAATGC-ACAAGGGAGAGCATCCGTCA 3658668
Query 10150 TGAAGTCCTTTTCGTTGGCGACCGCTTCCTCGACGATGCTCTTTACCACGTCAAGGGACA 10209
||| || | ||| | | ||| || || || |||||||| || | || |
Sbjct 3658667 GGAACTCTTGCTCGATTGTGACTGCCTCGGTGATGATGCTCTGGACGAGCTCCTTGCTTG 3658608
Query 10210 GCTTGTTCTCGAGCTTCGAATACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGC 10269
||||||||| || | || | || || | || | ||| | ||||| || |
Sbjct 3658607 GCTTGTTCTTCAGGTGAGAGAAGAGAAGACAAGCGAAGTCAGTGTGCATACCCTCATCAC 3658548
Query 10270 GGCTGATGAACTCGTTGGACAAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGA 10329
| ||||| ||||||||| || || || |||||||| || || || |||||| |
Sbjct 3658547 GAGAGATGAGCTCGTTGGAGAAGGTGAGCCCTGGCATGAGGCCACGCTTCTTCAGCCAAA 3658488
Query 10330 AAATGGCGCAGAACGACCCGGAGAACAGAAGACCCTCCACGCACACCCAGGCGACGAGGC 10389
| || || ||| || || ||||| | | |||||| ||| | |||||| ||| |
Sbjct 3658487 AGATTGCAGCGAAGGATCCCGAGAAGAAGATACCCTCGACGGCGGCGAAGGCGATGAGTC 3658428
Query 10390 GCTCTGCGAAGG 10401
| |||||||
Sbjct 3658427 GGCAGGCGAAGG 3658416
>seq13
Length=2085791
Score = 150 bits (166), Expect = 3e-31
Identities = 155/203 (76%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 68259 TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGC 68318
|| || |||||||| || || ||||| || ||||| || || | ||||| || | ||||
Sbjct 973602 TGCAGAGTGGACTCCTTCTGAATGTTGTAGTCGGACAGAGTACGGCCATCCTCAAGCTGC 973543
Query 68319 TTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTT 68378
|| || ||||| || | || || ||||| ||||||||||| |||||||| ||||||||
Sbjct 973542 TTACCAGCGAAGATCAATCGCTGCTGGTCTGGTGGAATGCCCTCCTTGTCCTGAATCTTC 973483
Query 68379 GCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTG 68438
| ||||||| ||||| ||||| | || || || || | ||||||||| || || ||
Sbjct 973482 GACTTGACGTTGTCGATAGTGTCAGAGGACTCAACCTCAAGGGTGATGGTCTTGCCAGTC 973423
Query 68439 AGGGTCTTGACGAATATCTGCAT 68461
|| |||||||| || || |||||
Sbjct 973422 AGAGTCTTGACAAAGATTTGCAT 973400
Score = 141 bits (156), Expect = 2e-28
Identities = 153/203 (75%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| |||||||| || | || | ||| || || ||||| || || ||||| ||||| |||
Sbjct 973398 CCACCGCGAAGACGAAGGACTAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAATCCGAG 973339
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| || || || || | | || ||||| ||||||
Sbjct 973338 AGGGTGCGGCCATCCTCAAGCTGCTTGCCTGCAAAGATCAAGCGCTGCTGGTCAGGTGGA 973279
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|||||||||||||| || ||||||| ||||||| |||||||| |||| || || ||
Sbjct 973278 ATGCCTTCCTTGTCCTGGATCTTTGACTTGACGTTGTCGATGGTATCTGAGGACTCGACC 973219
Query 68415 TCCAAGGTGATGGTTTTTCCCGT 68437
|| | ||||||||| || || ||
Sbjct 973218 TCAAGGGTGATGGTCTTGCCAGT 973196
Score = 134 bits (148), Expect = 3e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || ||||| || | |||||||| | ||| ||| || || ||||| || || ||
Sbjct 973854 CCACCACGAAGACGAAGCACCAAGTGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCAGAC 973795
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
| || | || || || | |||||| || ||||| ||||| | || || || ||||||
Sbjct 973794 AACGTACGGCCGTCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCTGGTGGA 973735
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || ||||||||||||||||| ||| || ||||| ||||| | ||| || |||
Sbjct 973734 ATACCCTCCTTGTCTTGAATCTTGCTCTTCACATTGTCGATTGTGTCCGATGACTCGACT 973675
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || || || || || ||||| ||||||||||| || |||||
Sbjct 973674 TCTAATGTAATAGTCTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 973628
>seq6
Length=1630888
Score = 134 bits (148), Expect = 3e-26
Identities = 150/199 (75%), Gaps = 1/199 (1%)
Strand=Plus/Plus
Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313
|||| || || || ||||| || |||||||| || || ||||| || | ||||| || |
Sbjct 190462 CAAGATGAAGTGTCGACTCCTTCTGGATGTTGTAGTCTGAGAGCGTGCGGCCATCCTCGA 190521
Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373
|||||| ||||| || || || | ||| ||||| ||||||||||| || || || ||||
Sbjct 190522 GCTGCTTTCCGGCAAAGATAAGACGTTGCTGGTCTGGTGGAATGCCCTCTTTATCCTGAA 190581
Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433
|||| ||| || ||||| || || | || || || || | ||||||||| || |
Sbjct 190582 TCTTGCTCTTCACATTGTCGATAGTATCGGAGGACTCAACCTCGAGGGTGATGGTCTTGC 190641
Query 68434 CCGTGAGGGTCTTGACGAA 68452
||||||||||||| |||||
Sbjct 190642 CCGTGAGGGTCTTCACGAA 190660
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921622238716080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |