Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15] 14 sequences; 19,024,943 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq12 154 3e-32 seq13 150 3e-31 seq6 134 3e-26 >seq12 Length=4887340 Score = 154 bits (170), Expect = 3e-32 Identities = 157/205 (77%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | |||| ||| || |||||||| || |||||||| || ||||| Sbjct 1403582 CCACCACGAAGTCGTAGGACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAA 1403641 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| |||||||| || || | || ||||| ||||| Sbjct 1403642 AGAGTGCGACCGTCCTCAAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGTGGT 1403701 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| ||||||||||||||||||| |||||| ||||| ||||||| || || || Sbjct 1403702 ATGCCCTCCTTGTCTTGAATCTTTGACTTGACATTGTCGATTGTGTCTGAAGACTCCACC 1403761 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGA 68439 || | |||||| || || ||||||| Sbjct 1403762 TCGAGGGTGATAGTCTTACCCGTGA 1403786 Score = 114 bits (126), Expect = 2e-20 Identities = 286/432 (66%), Gaps = 2/432 (0%) Strand=Plus/Minus Query 9971 CTCGAAGAAGTTGGACTTGCCCTCGAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTC 10030 |||||||||||| | |||||| | || || ||| |||||||||||| || ||||| | Sbjct 3658846 CTCGAAGAAGTTCGTCTTGCCAGCAAGCGAGATGTTCTCCATGAAGTCGAATGGGTTGAC 3658787 Query 10031 GGCGCCAAACTGCTTGGGGTAACCGAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGAT 10090 ||| | | ||||| || || || || || | ||||||||| ||||| ||||| Sbjct 3658786 AGCGTTGTAGTACTTGGTGTTGCCAAGGGCGAGCAACAGGCGGTCAGCAACGAATTCGAT 3658727 Query 10091 GTACTGGCTCATCAGGTCCGAGTTCATGCCAATC-ATGCGGCAGGGGATGGCGTCGCAAA 10149 ||| |||| ||| || | ||||||||||| | | |||| || |||| || || | Sbjct 3658726 GTATTGGCACATGAGCTTAGAGTTCATGCCGAGCAATGC-ACAAGGGAGAGCATCCGTCA 3658668 Query 10150 TGAAGTCCTTTTCGTTGGCGACCGCTTCCTCGACGATGCTCTTTACCACGTCAAGGGACA 10209 ||| || | ||| | | ||| || || || |||||||| || | || | Sbjct 3658667 GGAACTCTTGCTCGATTGTGACTGCCTCGGTGATGATGCTCTGGACGAGCTCCTTGCTTG 3658608 Query 10210 GCTTGTTCTCGAGCTTCGAATACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGC 10269 ||||||||| || | || | || || | || | ||| | ||||| || | Sbjct 3658607 GCTTGTTCTTCAGGTGAGAGAAGAGAAGACAAGCGAAGTCAGTGTGCATACCCTCATCAC 3658548 Query 10270 GGCTGATGAACTCGTTGGACAAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGA 10329 | ||||| ||||||||| || || || |||||||| || || || |||||| | Sbjct 3658547 GAGAGATGAGCTCGTTGGAGAAGGTGAGCCCTGGCATGAGGCCACGCTTCTTCAGCCAAA 3658488 Query 10330 AAATGGCGCAGAACGACCCGGAGAACAGAAGACCCTCCACGCACACCCAGGCGACGAGGC 10389 | || || ||| || || ||||| | | |||||| ||| | |||||| ||| | Sbjct 3658487 AGATTGCAGCGAAGGATCCCGAGAAGAAGATACCCTCGACGGCGGCGAAGGCGATGAGTC 3658428 Query 10390 GCTCTGCGAAGG 10401 | ||||||| Sbjct 3658427 GGCAGGCGAAGG 3658416 >seq13 Length=2085791 Score = 150 bits (166), Expect = 3e-31 Identities = 155/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 68259 TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGC 68318 || || |||||||| || || ||||| || ||||| || || | ||||| || | |||| Sbjct 973602 TGCAGAGTGGACTCCTTCTGAATGTTGTAGTCGGACAGAGTACGGCCATCCTCAAGCTGC 973543 Query 68319 TTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTT 68378 || || ||||| || | || || ||||| ||||||||||| |||||||| |||||||| Sbjct 973542 TTACCAGCGAAGATCAATCGCTGCTGGTCTGGTGGAATGCCCTCCTTGTCCTGAATCTTC 973483 Query 68379 GCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTG 68438 | ||||||| ||||| ||||| | || || || || | ||||||||| || || || Sbjct 973482 GACTTGACGTTGTCGATAGTGTCAGAGGACTCAACCTCAAGGGTGATGGTCTTGCCAGTC 973423 Query 68439 AGGGTCTTGACGAATATCTGCAT 68461 || |||||||| || || ||||| Sbjct 973422 AGAGTCTTGACAAAGATTTGCAT 973400 Score = 141 bits (156), Expect = 2e-28 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || |||||||| || | || | ||| || || ||||| || || ||||| ||||| ||| Sbjct 973398 CCACCGCGAAGACGAAGGACTAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAATCCGAG 973339 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || || || || | | || ||||| |||||| Sbjct 973338 AGGGTGCGGCCATCCTCAAGCTGCTTGCCTGCAAAGATCAAGCGCTGCTGGTCAGGTGGA 973279 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 |||||||||||||| || ||||||| ||||||| |||||||| |||| || || || Sbjct 973278 ATGCCTTCCTTGTCCTGGATCTTTGACTTGACGTTGTCGATGGTATCTGAGGACTCGACC 973219 Query 68415 TCCAAGGTGATGGTTTTTCCCGT 68437 || | ||||||||| || || || Sbjct 973218 TCAAGGGTGATGGTCTTGCCAGT 973196 Score = 134 bits (148), Expect = 3e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | |||||||| | ||| ||| || || ||||| || || || Sbjct 973854 CCACCACGAAGACGAAGCACCAAGTGCAAGGTGCTCTCCTTCTGAATGTTGTAGTCAGAC 973795 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | || || || | |||||| || ||||| ||||| | || || || |||||| Sbjct 973794 AACGTACGGCCGTCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCTGGTGGA 973735 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||||||||||||||| ||| || ||||| ||||| | ||| || ||| Sbjct 973734 ATACCCTCCTTGTCTTGAATCTTGCTCTTCACATTGTCGATTGTGTCCGATGACTCGACT 973675 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || || || || || ||||| ||||||||||| || ||||| Sbjct 973674 TCTAATGTAATAGTCTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 973628 >seq6 Length=1630888 Score = 134 bits (148), Expect = 3e-26 Identities = 150/199 (75%), Gaps = 1/199 (1%) Strand=Plus/Plus Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313 |||| || || || ||||| || |||||||| || || ||||| || | ||||| || | Sbjct 190462 CAAGATGAAGTGTCGACTCCTTCTGGATGTTGTAGTCTGAGAGCGTGCGGCCATCCTCGA 190521 Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373 |||||| ||||| || || || | ||| ||||| ||||||||||| || || || |||| Sbjct 190522 GCTGCTTTCCGGCAAAGATAAGACGTTGCTGGTCTGGTGGAATGCCCTCTTTATCCTGAA 190581 Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433 |||| ||| || ||||| || || | || || || || | ||||||||| || | Sbjct 190582 TCTTGCTCTTCACATTGTCGATAGTATCGGAGGACTCAACCTCGAGGGTGATGGTCTTGC 190641 Query 68434 CCGTGAGGGTCTTGACGAA 68452 ||||||||||||| ||||| Sbjct 190642 CCGTGAGGGTCTTCACGAA 190660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921622238716080