Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15] 14 sequences; 19,024,943 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq12 327 2e-84 seq11 215 1e-50 >seq12 Length=4887340 Score = 327 bits (362), Expect = 2e-84 Identities = 592/852 (69%), Gaps = 18/852 (2%) Strand=Plus/Plus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| |||||||||||||| || || |||||| || ||||| ||||||||| Sbjct 3658022 ATCTGGCAGATGTACAAGAAGGCCGAGGCGTCATTCTGGACGGCTGAGGAAATTGACCTG 3658081 Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGAACGAAAAG---TTTTTCCTCAAA 42416 | |||||| || |||| | | | | |||| || || ||| || Sbjct 3658082 TCAAAGGACCTTCACGACTGGAACAAGCGATTGAACGACGATGAGCGCTTCTTCGTCTCT 3658141 Query 42417 AACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGG 42476 || | || || ||||| || || |||||||| || ||||| |||||||| | | | Sbjct 3658142 CACGTGCTTGCATTCTTTGCTGCATCTGACGGAATCGTCAACGAGAACCTCGTCGAACGA 3658201 Query 42477 TTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATA 42536 |||| ||||| ||| | ||||| || |||||||||||||||||||| || Sbjct 3658202 TTCAGTGGTGAGGTCCAGATCCCAGAGGCTCGATGCTTCTACGGCTTCCAGATTATGATG 3658261 Query 42537 GAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCC-CGT 42595 |||||| | ||||||||| ||| | || || |||| |||||| || || || Sbjct 3658262 GAGAACATCCACTCTGAGACATACTCTCTCCTCATCGACACATACATCAGCGAGCCACGA 3658321 Query 42596 CGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGA 42655 | |||||| | |||||||| ||||| || | || || |||||| |||||||| || Sbjct 3658322 C-AGCGTACCTACCTGTTCAACGCCATCGACAACATTCCATGCATCCGTAAGAAGGCTGA 3658380 Query 42656 CTGGGCGCTCAACTGGATCGAGAGTC-CCGACGCAACGTTCGGCGAGAGGCTGGTAGCCT 42714 |||||| || |||||| || | | || | || |||| | | || | |||| Sbjct 3658381 CTGGGCTCTTCGATGGATC-AGCGACAAAAACTCCACCTTCGCCTGCCGACTCATCGCCT 3658439 Query 42715 TTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGC 42774 | ||||||||||||| |||||||||||||| ||||||| | ||||| ||||| ||| Sbjct 3658440 TCGCCGCCGTCGAGGGTATCTTCTTCTCGGGATCCTTCGCTGCAATCTTTTGGCTGAAGA 3658499 Query 42775 AG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGG 42833 || || || ||||| || ||||||||||| ||||| |||||| | || ||||| Sbjct 3658500 AGCGTGGCCTC-ATGCCAGGGCTCACCTTCTCCAACGAGCTCATCTCTCGTGATGAGGGT 3658558 Query 42834 CTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAG 42893 |||| | ||||| || || || || ||||| ||||| | | ||||||| ||| Sbjct 3658559 ATGCACACTGACTTCGCTTGTCTTCTCTTCTC---TCACCTGAAGAACAAGCCAAGCAAG 3658615 Query 42894 GAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAG 42953 |||| |||| | ||||||||| ||||| || |||||| | |||||||| ||| | Sbjct 3658616 GAGCTCGTCCAGAGCATCATCACCGAGGCAGTCACAATCGAGCAAGAGTTCCTGACGGAT 3658675 Query 42954 TCGCTGCCCGTGT-CCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTA 43012 | || ||| ||| | || ||||||||||| | ||||||||| | |||||| | | Sbjct 3658676 GCTCT-CCCTTGTGCATTGCTCGGCATGAACTCTAAGCTCATGTGCCAATACATCGAATT 3658734 Query 43013 CGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGT--GC 43070 ||| || |||| || || | | || || | ||||| |||| || | Sbjct 3658735 CGTTGCTGACCGCCTGTTGCTCGCCCTTGGCAACACCAAGTACTACA--ACGCTGTCAAC 3658792 Query 43071 CCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGC 43130 || |||||||| ||||||||||||||| | | |||||||| ||||| ||||||||||| Sbjct 3658793 CCATTCGACTTCATGGAGAACATCTCGCTTGCTGGCAAGACGAACTTCTTCGAGAAGCGT 3658852 Query 43131 GTCGCCGACTAC 43142 |||| ||||||| Sbjct 3658853 GTCGGCGACTAC 3658864 >seq11 Length=3629084 Score = 215 bits (238), Expect = 1e-50 Identities = 672/1019 (66%), Gaps = 41/1019 (4%) Strand=Plus/Minus Query 244394 AGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCT-TGCCGCA 244452 || ||||| | || ||||||||||||||| |||| | | || |||| || | | Sbjct 2143549 AGTGCGGCATGATACATGGTCTCGAAGATCTGAATGTTGAGCTGACGAGCCTCTGGAG-A 2143491 Query 244453 GGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCC-CTGCACGCCGATGCCGA 244511 | || || |||| || | ||| |||| ||||| || ||| || || | ||||| Sbjct 2143490 GTCAAATGGCATGCGCAGAGCAAGGAATGCGTCAGCCAGACCACTG-ACTCCAAGGCCGA 2143432 Query 244512 TGGGTCTGTGTCGCTTGTTGGAGCGCATG-GCTTCGGGCACGGGGTAAAAGTTGCCGTCG 244570 | || ||||| ||| |||| || | | | || || ||||| ||||| |||| |||| Sbjct 2143431 TAGGCCTGTGGCGCATGTTCGA-CTTACGAGCCTCCGGCACAGGGTAGTGGTTGATGTCG 2143373 Query 244571 ATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCG 244630 || ||||||||||| ||| | | ||||||| ||| |||| ||| |||||| Sbjct 2143372 ATGGTTTTGTTGAGGTTCTTGGTAACGACCTGGACGACCTCGTGCAGCTTCTGGAAGTCG 2143313 Query 244631 TACTCGTAGGGATCCTCG--GCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGG 244688 | || |||| | || ||| | | | || | | ||| || | | Sbjct 2143312 AAA-CG--------CTCGTTGTGAAGGTCAACGT----AAGTTGG-GAGTGCAATAGATG 2143267 Query 244689 CCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGT 244748 | ||||||||||| || ||||| || | | |||| || ||||||||||| | || Sbjct 2143266 CAAGGTTGCAGACAGCAACCTCATCGGGTGCGCAATACTCGATGATCTCGGTGCACAAGT 2143207 Query 244749 TACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGT 244808 | || ||| ||||| |||| || || ||| |||| ||| || || ||||||| Sbjct 2143206 TGGAGCTGCGGATAGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTACAAGCATCCTTGT 2143147 Query 244809 AGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCC 244868 |||||||| | || || |||||| || | | |||| || |||||| | | Sbjct 2143146 AGAGCATGTATGGGGTGCCAGTCTCGGTTTGAGACTCAAGGATAGCGTACCAGAGCTTCT 2143087 Query 244869 TAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGA 244928 || || ||| ||| | ||||| |||| || | ||| || ||| | Sbjct 2143086 GGGCGCGCACAGTCTCACGACCACGACCCTCGCCCTCATACTGCTCGTAGAGCTTCTCAA 2143027 Query 244929 ACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACT 244988 |||| || |||| || | |||||||||||| || ||||||||| |||||| Sbjct 2143026 ACTCCTCTCCATAGACATCTGCAAGGCCGGGGCACTCATTTGGACACATGAGAGTCCACT 2142967 Query 244989 CGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGT 245048 ||||| | || ||| | || ||||||||| || || ||||||||||| | |||||| | Sbjct 2142966 CGCCGTTGGACTCGACACGCTTCATGAAGAGATCTGGTATCCAGAGGGCGTAGAAGAGAT 2142907 Query 245049 CCCTGGTCCTCTGCTCGTCCGAGCCAGTG-TTCTTCCTCAGCTCCAAAAAGTCAAAGACG 245107 | | | | ||| ||| ||| ||| ||||| | || || | ||| |||| || Sbjct 2142906 CGCGAGCGCGAACCTCTTCCTTGCC-GTGATTCTTGCGGAGGTCGAGGAAGGCAAACACA 2142848 Query 245108 TCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGG 245167 ||| ||||||| ||||||| ||||| |||| || || || || |||||||| |||||| Sbjct 2142847 TCGGCGTGCCATGGCTCCAAGTAGATGGCGAATGCACCTGGTCGTTTGTTGCCGCCCTGG 2142788 Query 245168 TCCACCATCCTCTCGAGCG----CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGA 245223 | || | | ||| ||| |||||| | ||||| |||| || | ||||| || Sbjct 2142787 T----CAACGTATCGGGCGGTGTTGTTGAACACTCGCAGCATAGGGACGAGACCGTTGGA 2142732 Query 245224 GTGGCCGTTGGTGCCCTTGATGTAGGCGCC-CTTGCCC--CTGAGGT-TGCTGATGGACA 245279 |||||||||||| ||||||| | || || || | || | | ||| | || | Sbjct 2142731 CGTGCCGTTGGTGCCACTGATGTATGAACCACTAGCACGAATGCGATGTGC-GTTG---A 2142676 Query 245280 TGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGC 245339 || | || || || | || ||||| | ||||| |||||| ||||| |||| Sbjct 2142675 GACCGACGCCACCAGCATTTTTTGAGATCATAGCGCAAGTCTTGAGCGTGTCGTAGATGC 2142616 Query 245340 CCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGG 245398 |||| ||||||||| |||||||| || || ||||| || | |||| | ||||| || Sbjct 2142615 CCTCAATGCTGTCCTCCTTCATGTCGACAAGGAAGCATGATGCGAGCT-GTGCTTGTGG 2142558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944339034740640