Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peltaster_20fructicola_20[genbank_20GCA_5F001592805.1_202016-03-15] 14 sequences; 19,024,943 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq11 188 9e-43 seq12 105 8e-18 >seq11 Length=3629084 Score = 188 bits (208), Expect = 9e-43 Identities = 896/1398 (64%), Gaps = 37/1398 (3%) Strand=Plus/Minus Query 113941 ATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGA 114000 ||| || |||| ||||||||||| |||||||| ||| |||| ||| || ||| || Sbjct 2143805 ATAAATGTTGGAAGTGTATGGCTCGAAGCACTCGTTGAAGCCCATGATCTGACTGGTCGA 2143746 Query 114001 GGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTC 114060 ||| || ||||| ||||||||||| || ||| || | ||| | || || | Sbjct 2143745 GGCAGTTGGCATTGGTGCCATGAGCAGAGAGTTTCGTACACCGTGTTGTGCGATCTTAGC 2143686 Query 114061 CTTGAGGGCGTCCCAGTCGTAGTTGAGCTT--TGTCTCCCCCTGCCACATATCAAACTGG 114118 |||||| || |||||||| | || || || | | |||||| || ||||| Sbjct 2143685 CTTGAGTGCATCCCAGTCCCACA--AGTTTGATGGAGTGACATTCCACATGTCGTACTGG 2143628 Query 114119 AGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGC- 114177 || || | ||| |||| || || || |||||||||| | || || || || Sbjct 2143627 AGCTCGCCCTTGGACACTGGAGAGCCTTCGTATGTCTCGTACGTACC---AAGCTTGGCA 2143571 Query 114178 -CAAT-TCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTC 114235 ||| || | || || || || |||||||| ||||| || || || || Sbjct 2143570 GCAAGATCACATGATGCAGTCAGTGCGGCATGATACATGGTCTCGAAGATCTGAATGTTG 2143511 Query 114236 AT-TGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAA-AATAAATACATCCGCGA 114293 | || | | |||| || ||||| | | || || | || ||| | || || | Sbjct 2143510 AGCTGACGAG-CCTCTGGAGAGTCAAATGGCATGCG-CAGAGCAAGGAATGCGTCAGCCA 2143453 Query 114294 GACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCA 114353 |||| ||| || ||||| || || | || | ||| || ||||| ||||| | || Sbjct 2143452 GACCACTGACTCCAAGGCCGATAGGCCTGTGGCGCATGTTCGACTTACGAGCCTCCGGCA 2143393 Query 114354 CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTT 114413 | || || || | ||||| | || || || ||||| || |||| || | Sbjct 2143392 CAGGGTAGTGGTTGATGTCGATGGTTTTGTTGAGGTTCTTGGTAACGACCTGGACGACCT 2143333 Query 114414 CATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCA--TTGACATACTTAGGAAGGGC 114471 | || ||||| | | | || |||| || || | | | | || || | || || || Sbjct 2143332 CGTGCAGCTTCTGGAAGTCGAAAC-GCTCGT-TGTGAAGGTCAACGTAAGTTGGGAGTGC 2143275 Query 114472 GATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGT 114531 || || || || || || |||| |||||| | ||||| || || || || Sbjct 2143274 AATAGATGCAAGGTTGCAGACAGCAACCTCATCGGGTGCGCAATACTCGATGATCTCGGT 2143215 Query 114532 ACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGC 114591 ||||| || || || || ||||| | |||||| || || ||| |||||| || Sbjct 2143214 GCACAAGTTGGAGCTGCGGATAGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTACAAGC 2143155 Query 114592 ATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA 114651 ||||||||| ||||||||||| || || ||||| ||||| |||| || ||||| | ||| Sbjct 2143154 ATCCTTGTAGAGCATGTATGGGGTGCCAGTCTCGGTTTGAGACTCAAGGATAGCGTACCA 2143095 Query 114652 GA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGA 114710 || | || | ||| ||||||| | | || ||||| |||| |||| ||||| Sbjct 2143094 GAGCTTCTG-GGCGCGCACAGTCTCACGACCACGACCCTCGCCCTCATACTGCTCGTAGA 2143036 Query 114711 GGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGA 114770 | |||||||| || || | | |||| || || || || || ||| || | || Sbjct 2143035 GCTTCTCAAACTCCTCTCCATAGACATCTGCAAGGCCGGGGCACTCATTTGGACACATGA 2142976 Query 114771 GAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTG 114830 ||| ||| | || ||| ||||||||||||||||| ||||| |||||||| || Sbjct 2142975 GAGTCCACTCGCCGTTGGACTCGACACGCTTCATGAAGAGATCTGGTATCCAGAGGGCGT 2142916 Query 114831 AGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGT 114890 |||||||||| ||| |||| | ||||| | || ||||| || | || | ||| Sbjct 2142915 AGAAGAGATCGCGAGCGCGAACCTCTTCCTTGCCGTGATTCTTGCGGAGGTCGAGGAAGG 2142856 Query 114891 CCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC---CCTTACGACGA 114946 | | | ||| |||||||| || |||| ||| | |||| || ||| | | | | Sbjct 2142855 CAAACACATCGGCGTGCCATGGCTCCAAGTAGATGGCGAATGCACCTGGTCGTTTGTTG- 2142797 Query 114947 CCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCA 115006 || |||||| || || | || ||| || || || || ||||| || | || ||| Sbjct 2142796 CCGCCCTGGTCAACGTATCGGGCGGTGTTGTTGAACACTCGCAGCATAGGGACGAGACCG 2142737 Query 115007 TCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCATG-GATGTG 115065 | || ||| || || || | || || | | || | || ||| |||||| Sbjct 2142736 TTGGACGTGCCGTTGGTGCCACTGATGTATGAACCACTAGCAC-GA----ATGCGATGTG 2142682 Query 115066 C----ATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGT 115121 | | ||| | || || || |||||||| ||||| | |||| || ||| Sbjct 2142681 CGTTGAGACCGACGCCACCAGCATTTTTTGAGATCATAGCGCAAGTCTTGAGCGTGTCGT 2142622 Query 115122 AGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCC 115181 |||| || || || ||| |||| | ||| ||||||||| | | |||| Sbjct 2142621 AGATGCCCTCAATGCTGTCCTCCTTCATGTCGACAAGGAAGCATGATGCGAGCTGTGCTT 2142562 Query 115182 TTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATC 115240 |||||| |||||| ||||| ||||| | ||||| |||| ||| | | |||||| Sbjct 2142561 GTGGTGTGCCAGCGGCAAAGAGCGTTGGCGAGGCGTGTGTGAA-GTACTTGTTGGACATG 2142503 Query 115241 TTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGC 115300 | ||| || || | | | || |||||| || || || ||||||| | || ||| Sbjct 2142502 AGGTTGTAAGTTTCGATGGCAGCCTCAATGTCCTCTCCATGTATACCGACAGCCACACGC 2142443 Query 115301 ATAAACATGTATTGGGGT 115318 |||| ||||| || ||| Sbjct 2142442 ATAATCATGTGCTGTGGT 2142425 >seq12 Length=4887340 Score = 105 bits (116), Expect = 8e-18 Identities = 106/138 (77%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117 ||| | |||||| ||||| |||||||| || || |||||| || ||||||||||| || Sbjct 3658564 GTGCATACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTGAGCCCTGGCATGAGGCC 3658505 Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177 |||||||||| ||| || || ||| || || |||||||||||||| ||||| || Sbjct 3658504 ACGCTTCTTCAGCCAAAAGATTGCAGCGAAGGATCCCGAGAAGAAGATACCCTCGACGGC 3658445 Query 126178 CGCGAACGCAAAGAGACG 126195 ||||| || | ||| || Sbjct 3658444 GGCGAAGGCGATGAGTCG 3658427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353495463120